Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7076 | 21451;21452;21453 | chr2:178724033;178724032;178724031 | chr2:179588760;179588759;179588758 |
N2AB | 6759 | 20500;20501;20502 | chr2:178724033;178724032;178724031 | chr2:179588760;179588759;179588758 |
N2A | 5832 | 17719;17720;17721 | chr2:178724033;178724032;178724031 | chr2:179588760;179588759;179588758 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs374625641 | 0.406 | 0.473 | N | 0.535 | 0.216 | None | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
A/V | rs374625641 | 0.406 | 0.473 | N | 0.535 | 0.216 | None | gnomAD-4.0.0 | 2.2583E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69876E-05 | 0 | 4.97183E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5306 | ambiguous | 0.5317 | ambiguous | -0.518 | Destabilizing | 0.995 | D | 0.596 | neutral | None | None | None | None | N |
A/D | 0.2124 | likely_benign | 0.2019 | benign | -1.495 | Destabilizing | 0.473 | N | 0.558 | neutral | D | 0.524303988 | None | None | N |
A/E | 0.1912 | likely_benign | 0.1923 | benign | -1.432 | Destabilizing | 0.329 | N | 0.525 | neutral | None | None | None | None | N |
A/F | 0.3232 | likely_benign | 0.2851 | benign | -0.766 | Destabilizing | 0.893 | D | 0.555 | neutral | None | None | None | None | N |
A/G | 0.1395 | likely_benign | 0.1327 | benign | -1.168 | Destabilizing | 0.27 | N | 0.508 | neutral | N | 0.480110494 | None | None | N |
A/H | 0.4359 | ambiguous | 0.4161 | ambiguous | -1.527 | Destabilizing | 0.017 | N | 0.542 | neutral | None | None | None | None | N |
A/I | 0.2621 | likely_benign | 0.2343 | benign | 0.004 | Stabilizing | 0.543 | D | 0.577 | neutral | None | None | None | None | N |
A/K | 0.4655 | ambiguous | 0.4396 | ambiguous | -1.095 | Destabilizing | 0.543 | D | 0.54 | neutral | None | None | None | None | N |
A/L | 0.2013 | likely_benign | 0.1848 | benign | 0.004 | Stabilizing | 0.007 | N | 0.454 | neutral | None | None | None | None | N |
A/M | 0.2496 | likely_benign | 0.2195 | benign | 0.072 | Stabilizing | 0.893 | D | 0.571 | neutral | None | None | None | None | N |
A/N | 0.2289 | likely_benign | 0.2115 | benign | -0.939 | Destabilizing | 0.007 | N | 0.542 | neutral | None | None | None | None | N |
A/P | 0.8458 | likely_pathogenic | 0.832 | pathogenic | -0.229 | Destabilizing | 0.927 | D | 0.593 | neutral | N | 0.499152683 | None | None | N |
A/Q | 0.2997 | likely_benign | 0.2935 | benign | -0.969 | Destabilizing | 0.085 | N | 0.357 | neutral | None | None | None | None | N |
A/R | 0.3736 | ambiguous | 0.352 | ambiguous | -0.918 | Destabilizing | 0.704 | D | 0.571 | neutral | None | None | None | None | N |
A/S | 0.0795 | likely_benign | 0.0782 | benign | -1.273 | Destabilizing | 0.01 | N | 0.259 | neutral | N | 0.371091943 | None | None | N |
A/T | 0.0798 | likely_benign | 0.0757 | benign | -1.111 | Destabilizing | 0.473 | N | 0.519 | neutral | N | 0.38258116 | None | None | N |
A/V | 0.1457 | likely_benign | 0.1307 | benign | -0.229 | Destabilizing | 0.473 | N | 0.535 | neutral | N | 0.466661194 | None | None | N |
A/W | 0.722 | likely_pathogenic | 0.6977 | pathogenic | -1.347 | Destabilizing | 0.995 | D | 0.651 | neutral | None | None | None | None | N |
A/Y | 0.4468 | ambiguous | 0.4145 | ambiguous | -0.824 | Destabilizing | 0.893 | D | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.