Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7078 | 21457;21458;21459 | chr2:178724027;178724026;178724025 | chr2:179588754;179588753;179588752 |
N2AB | 6761 | 20506;20507;20508 | chr2:178724027;178724026;178724025 | chr2:179588754;179588753;179588752 |
N2A | 5834 | 17725;17726;17727 | chr2:178724027;178724026;178724025 | chr2:179588754;179588753;179588752 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.026 | N | 0.309 | 0.213 | 0.206339911435 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8656 | likely_pathogenic | 0.8749 | pathogenic | -2.551 | Highly Destabilizing | 0.919 | D | 0.624 | neutral | None | None | None | None | N |
F/C | 0.6861 | likely_pathogenic | 0.682 | pathogenic | -1.468 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | N | 0.501627996 | None | None | N |
F/D | 0.9144 | likely_pathogenic | 0.9332 | pathogenic | -1.79 | Destabilizing | 0.996 | D | 0.766 | deleterious | None | None | None | None | N |
F/E | 0.888 | likely_pathogenic | 0.9159 | pathogenic | -1.687 | Destabilizing | 0.996 | D | 0.751 | deleterious | None | None | None | None | N |
F/G | 0.9182 | likely_pathogenic | 0.9214 | pathogenic | -2.904 | Highly Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
F/H | 0.5978 | likely_pathogenic | 0.6229 | pathogenic | -1.189 | Destabilizing | 0.988 | D | 0.666 | neutral | None | None | None | None | N |
F/I | 0.4104 | ambiguous | 0.4531 | ambiguous | -1.462 | Destabilizing | 0.811 | D | 0.498 | neutral | N | 0.459036703 | None | None | N |
F/K | 0.8831 | likely_pathogenic | 0.906 | pathogenic | -1.374 | Destabilizing | 0.988 | D | 0.749 | deleterious | None | None | None | None | N |
F/L | 0.915 | likely_pathogenic | 0.9189 | pathogenic | -1.462 | Destabilizing | 0.026 | N | 0.309 | neutral | N | 0.449570503 | None | None | N |
F/M | 0.7112 | likely_pathogenic | 0.7354 | pathogenic | -1.199 | Destabilizing | 0.976 | D | 0.556 | neutral | None | None | None | None | N |
F/N | 0.7359 | likely_pathogenic | 0.7821 | pathogenic | -1.444 | Destabilizing | 0.996 | D | 0.764 | deleterious | None | None | None | None | N |
F/P | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -1.823 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
F/Q | 0.8338 | likely_pathogenic | 0.8564 | pathogenic | -1.586 | Destabilizing | 0.996 | D | 0.768 | deleterious | None | None | None | None | N |
F/R | 0.7976 | likely_pathogenic | 0.8225 | pathogenic | -0.665 | Destabilizing | 0.988 | D | 0.762 | deleterious | None | None | None | None | N |
F/S | 0.6446 | likely_pathogenic | 0.6754 | pathogenic | -2.243 | Highly Destabilizing | 0.984 | D | 0.711 | prob.delet. | N | 0.456163094 | None | None | N |
F/T | 0.7667 | likely_pathogenic | 0.8087 | pathogenic | -2.046 | Highly Destabilizing | 0.988 | D | 0.708 | prob.delet. | None | None | None | None | N |
F/V | 0.4855 | ambiguous | 0.5162 | ambiguous | -1.823 | Destabilizing | 0.811 | D | 0.559 | neutral | N | 0.465620069 | None | None | N |
F/W | 0.4988 | ambiguous | 0.4921 | ambiguous | -0.505 | Destabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | N |
F/Y | 0.1181 | likely_benign | 0.1229 | benign | -0.727 | Destabilizing | 0.046 | N | 0.217 | neutral | N | 0.42255726 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.