Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7079 | 21460;21461;21462 | chr2:178724024;178724023;178724022 | chr2:179588751;179588750;179588749 |
N2AB | 6762 | 20509;20510;20511 | chr2:178724024;178724023;178724022 | chr2:179588751;179588750;179588749 |
N2A | 5835 | 17728;17729;17730 | chr2:178724024;178724023;178724022 | chr2:179588751;179588750;179588749 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs781652689 | None | 0.042 | N | 0.431 | 0.105 | 0.0762999501168 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4505 | ambiguous | 0.3946 | ambiguous | -1.355 | Destabilizing | 0.055 | N | 0.544 | neutral | None | None | None | None | N |
H/C | 0.2397 | likely_benign | 0.2306 | benign | -0.784 | Destabilizing | 0.958 | D | 0.689 | prob.neutral | None | None | None | None | N |
H/D | 0.4573 | ambiguous | 0.4164 | ambiguous | -1.078 | Destabilizing | 0.175 | N | 0.594 | neutral | N | 0.461274748 | None | None | N |
H/E | 0.3713 | ambiguous | 0.3291 | benign | -0.924 | Destabilizing | 0.055 | N | 0.353 | neutral | None | None | None | None | N |
H/F | 0.391 | ambiguous | 0.3815 | ambiguous | 0.046 | Stabilizing | 0.124 | N | 0.664 | neutral | None | None | None | None | N |
H/G | 0.4623 | ambiguous | 0.4138 | ambiguous | -1.763 | Destabilizing | 0.104 | N | 0.581 | neutral | None | None | None | None | N |
H/I | 0.4359 | ambiguous | 0.4456 | ambiguous | -0.185 | Destabilizing | 0.124 | N | 0.682 | prob.neutral | None | None | None | None | N |
H/K | 0.1723 | likely_benign | 0.1781 | benign | -0.922 | Destabilizing | 0.002 | N | 0.361 | neutral | None | None | None | None | N |
H/L | 0.1307 | likely_benign | 0.1293 | benign | -0.185 | Destabilizing | 0.015 | N | 0.561 | neutral | N | 0.462729014 | None | None | N |
H/M | 0.5433 | ambiguous | 0.543 | ambiguous | -0.433 | Destabilizing | 0.009 | N | 0.553 | neutral | None | None | None | None | N |
H/N | 0.2173 | likely_benign | 0.1941 | benign | -1.313 | Destabilizing | 0.175 | N | 0.455 | neutral | N | 0.451070532 | None | None | N |
H/P | 0.5758 | likely_pathogenic | 0.4864 | ambiguous | -0.559 | Destabilizing | 0.301 | N | 0.682 | prob.neutral | N | 0.481847765 | None | None | N |
H/Q | 0.1511 | likely_benign | 0.1352 | benign | -0.981 | Destabilizing | None | N | 0.177 | neutral | N | 0.479199977 | None | None | N |
H/R | 0.0782 | likely_benign | 0.0735 | benign | -1.17 | Destabilizing | 0.042 | N | 0.431 | neutral | N | 0.444564541 | None | None | N |
H/S | 0.3952 | ambiguous | 0.3382 | benign | -1.493 | Destabilizing | 0.055 | N | 0.527 | neutral | None | None | None | None | N |
H/T | 0.4932 | ambiguous | 0.4487 | ambiguous | -1.22 | Destabilizing | 0.22 | N | 0.62 | neutral | None | None | None | None | N |
H/V | 0.3778 | ambiguous | 0.3737 | ambiguous | -0.559 | Destabilizing | 0.055 | N | 0.593 | neutral | None | None | None | None | N |
H/W | 0.3624 | ambiguous | 0.3432 | ambiguous | 0.474 | Stabilizing | 0.958 | D | 0.665 | neutral | None | None | None | None | N |
H/Y | 0.1245 | likely_benign | 0.1199 | benign | 0.503 | Stabilizing | 0.003 | N | 0.17 | neutral | N | 0.46051428 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.