Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7088 | 21487;21488;21489 | chr2:178723997;178723996;178723995 | chr2:179588724;179588723;179588722 |
N2AB | 6771 | 20536;20537;20538 | chr2:178723997;178723996;178723995 | chr2:179588724;179588723;179588722 |
N2A | 5844 | 17755;17756;17757 | chr2:178723997;178723996;178723995 | chr2:179588724;179588723;179588722 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.425 | N | 0.175 | 0.127 | 0.149567049428 | gnomAD-4.0.0 | 3.18375E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85948E-06 | 0 | 3.0259E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4405 | ambiguous | 0.4415 | ambiguous | -0.791 | Destabilizing | 0.995 | D | 0.303 | neutral | None | None | None | None | N |
A/D | 0.109 | likely_benign | 0.1093 | benign | -0.546 | Destabilizing | 0.003 | N | 0.166 | neutral | None | None | None | None | N |
A/E | 0.1003 | likely_benign | 0.1025 | benign | -0.7 | Destabilizing | 0.001 | N | 0.137 | neutral | N | 0.409318604 | None | None | N |
A/F | 0.2154 | likely_benign | 0.2061 | benign | -0.865 | Destabilizing | 0.944 | D | 0.389 | neutral | None | None | None | None | N |
A/G | 0.1019 | likely_benign | 0.1004 | benign | -0.193 | Destabilizing | 0.425 | N | 0.208 | neutral | N | 0.403237994 | None | None | N |
A/H | 0.2787 | likely_benign | 0.2703 | benign | -0.157 | Destabilizing | 0.007 | N | 0.173 | neutral | None | None | None | None | N |
A/I | 0.1522 | likely_benign | 0.1418 | benign | -0.348 | Destabilizing | 0.944 | D | 0.425 | neutral | None | None | None | None | N |
A/K | 0.1808 | likely_benign | 0.1838 | benign | -0.535 | Destabilizing | 0.329 | N | 0.326 | neutral | None | None | None | None | N |
A/L | 0.1088 | likely_benign | 0.1093 | benign | -0.348 | Destabilizing | 0.704 | D | 0.31 | neutral | None | None | None | None | N |
A/M | 0.1604 | likely_benign | 0.1493 | benign | -0.502 | Destabilizing | 0.981 | D | 0.31 | neutral | None | None | None | None | N |
A/N | 0.1301 | likely_benign | 0.1282 | benign | -0.215 | Destabilizing | 0.543 | D | 0.305 | neutral | None | None | None | None | N |
A/P | 0.083 | likely_benign | 0.0824 | benign | -0.266 | Destabilizing | 0.006 | N | 0.19 | neutral | N | 0.380747923 | None | None | N |
A/Q | 0.1557 | likely_benign | 0.1602 | benign | -0.495 | Destabilizing | 0.085 | N | 0.186 | neutral | None | None | None | None | N |
A/R | 0.1655 | likely_benign | 0.1711 | benign | -0.069 | Destabilizing | 0.704 | D | 0.325 | neutral | None | None | None | None | N |
A/S | 0.075 | likely_benign | 0.0775 | benign | -0.396 | Destabilizing | 0.425 | N | 0.203 | neutral | N | 0.397832174 | None | None | N |
A/T | 0.0725 | likely_benign | 0.0712 | benign | -0.477 | Destabilizing | 0.425 | N | 0.175 | neutral | N | 0.458016628 | None | None | N |
A/V | 0.0895 | likely_benign | 0.0866 | benign | -0.266 | Destabilizing | 0.784 | D | 0.171 | neutral | N | 0.47746918 | None | None | N |
A/W | 0.4484 | ambiguous | 0.4404 | ambiguous | -0.968 | Destabilizing | 0.995 | D | 0.394 | neutral | None | None | None | None | N |
A/Y | 0.2941 | likely_benign | 0.2787 | benign | -0.643 | Destabilizing | 0.893 | D | 0.451 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.