Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7094 | 21505;21506;21507 | chr2:178723979;178723978;178723977 | chr2:179588706;179588705;179588704 |
N2AB | 6777 | 20554;20555;20556 | chr2:178723979;178723978;178723977 | chr2:179588706;179588705;179588704 |
N2A | 5850 | 17773;17774;17775 | chr2:178723979;178723978;178723977 | chr2:179588706;179588705;179588704 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.003 | N | 0.493 | 0.286 | 0.605748623547 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6515 | likely_pathogenic | 0.6732 | pathogenic | -1.728 | Destabilizing | 0.404 | N | 0.657 | neutral | None | None | None | None | N |
F/C | 0.3904 | ambiguous | 0.4184 | ambiguous | -0.878 | Destabilizing | 0.965 | D | 0.735 | prob.delet. | N | 0.505709596 | None | None | N |
F/D | 0.89 | likely_pathogenic | 0.9154 | pathogenic | 0.258 | Stabilizing | 0.826 | D | 0.738 | prob.delet. | None | None | None | None | N |
F/E | 0.8976 | likely_pathogenic | 0.9239 | pathogenic | 0.301 | Stabilizing | 0.704 | D | 0.713 | prob.delet. | None | None | None | None | N |
F/G | 0.8538 | likely_pathogenic | 0.8721 | pathogenic | -2.015 | Highly Destabilizing | 0.404 | N | 0.682 | prob.neutral | None | None | None | None | N |
F/H | 0.713 | likely_pathogenic | 0.7453 | pathogenic | -0.432 | Destabilizing | 0.973 | D | 0.661 | neutral | None | None | None | None | N |
F/I | 0.2096 | likely_benign | 0.2288 | benign | -0.915 | Destabilizing | 0.338 | N | 0.582 | neutral | D | 0.535174343 | None | None | N |
F/K | 0.9033 | likely_pathogenic | 0.9298 | pathogenic | -0.708 | Destabilizing | 0.704 | D | 0.705 | prob.neutral | None | None | None | None | N |
F/L | 0.819 | likely_pathogenic | 0.8106 | pathogenic | -0.915 | Destabilizing | 0.003 | N | 0.3 | neutral | N | 0.479513061 | None | None | N |
F/M | 0.5592 | ambiguous | 0.5802 | pathogenic | -0.709 | Destabilizing | 0.826 | D | 0.638 | neutral | None | None | None | None | N |
F/N | 0.7696 | likely_pathogenic | 0.8009 | pathogenic | -0.631 | Destabilizing | 0.704 | D | 0.741 | deleterious | None | None | None | None | N |
F/P | 0.984 | likely_pathogenic | 0.9883 | pathogenic | -1.173 | Destabilizing | 0.826 | D | 0.744 | deleterious | None | None | None | None | N |
F/Q | 0.8494 | likely_pathogenic | 0.8774 | pathogenic | -0.693 | Destabilizing | 0.826 | D | 0.746 | deleterious | None | None | None | None | N |
F/R | 0.7935 | likely_pathogenic | 0.8374 | pathogenic | -0.14 | Destabilizing | 0.826 | D | 0.741 | deleterious | None | None | None | None | N |
F/S | 0.5242 | ambiguous | 0.5419 | ambiguous | -1.496 | Destabilizing | 0.003 | N | 0.493 | neutral | N | 0.506467589 | None | None | N |
F/T | 0.6351 | likely_pathogenic | 0.6588 | pathogenic | -1.359 | Destabilizing | 0.404 | N | 0.687 | prob.neutral | None | None | None | None | N |
F/V | 0.2072 | likely_benign | 0.2212 | benign | -1.173 | Destabilizing | 0.338 | N | 0.626 | neutral | N | 0.49815475 | None | None | N |
F/W | 0.5944 | likely_pathogenic | 0.6193 | pathogenic | -0.332 | Destabilizing | 0.991 | D | 0.641 | neutral | None | None | None | None | N |
F/Y | 0.2094 | likely_benign | 0.2186 | benign | -0.446 | Destabilizing | 0.674 | D | 0.601 | neutral | N | 0.469565426 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.