Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7096 | 21511;21512;21513 | chr2:178723973;178723972;178723971 | chr2:179588700;179588699;179588698 |
N2AB | 6779 | 20560;20561;20562 | chr2:178723973;178723972;178723971 | chr2:179588700;179588699;179588698 |
N2A | 5852 | 17779;17780;17781 | chr2:178723973;178723972;178723971 | chr2:179588700;179588699;179588698 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1482277729 | -0.1 | 0.006 | N | 0.119 | 0.049 | 0.0762999501168 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/E | rs1482277729 | -0.1 | 0.006 | N | 0.119 | 0.049 | 0.0762999501168 | gnomAD-4.0.0 | 6.84317E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15947E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.243 | likely_benign | 0.302 | benign | 0.009 | Stabilizing | 0.505 | D | 0.425 | neutral | N | 0.459833171 | None | None | N |
D/C | 0.7229 | likely_pathogenic | 0.7915 | pathogenic | -0.125 | Destabilizing | 0.991 | D | 0.541 | neutral | None | None | None | None | N |
D/E | 0.1831 | likely_benign | 0.2017 | benign | -0.284 | Destabilizing | 0.006 | N | 0.119 | neutral | N | 0.440855019 | None | None | N |
D/F | 0.743 | likely_pathogenic | 0.8055 | pathogenic | -0.013 | Destabilizing | 0.967 | D | 0.473 | neutral | None | None | None | None | N |
D/G | 0.1416 | likely_benign | 0.176 | benign | -0.114 | Destabilizing | 0.338 | N | 0.398 | neutral | N | 0.473751298 | None | None | N |
D/H | 0.3428 | ambiguous | 0.3953 | ambiguous | 0.568 | Stabilizing | 0.782 | D | 0.377 | neutral | N | 0.471291608 | None | None | N |
D/I | 0.6303 | likely_pathogenic | 0.7369 | pathogenic | 0.27 | Stabilizing | 0.906 | D | 0.472 | neutral | None | None | None | None | N |
D/K | 0.4065 | ambiguous | 0.4831 | ambiguous | 0.487 | Stabilizing | 0.404 | N | 0.396 | neutral | None | None | None | None | N |
D/L | 0.5508 | ambiguous | 0.6451 | pathogenic | 0.27 | Stabilizing | 0.826 | D | 0.47 | neutral | None | None | None | None | N |
D/M | 0.7609 | likely_pathogenic | 0.8223 | pathogenic | 0.084 | Stabilizing | 0.991 | D | 0.48 | neutral | None | None | None | None | N |
D/N | 0.1056 | likely_benign | 0.117 | benign | 0.155 | Stabilizing | 0.001 | N | 0.119 | neutral | N | 0.489686329 | None | None | N |
D/P | 0.7545 | likely_pathogenic | 0.8372 | pathogenic | 0.203 | Stabilizing | 0.906 | D | 0.391 | neutral | None | None | None | None | N |
D/Q | 0.3737 | ambiguous | 0.4363 | ambiguous | 0.175 | Stabilizing | 0.826 | D | 0.332 | neutral | None | None | None | None | N |
D/R | 0.4275 | ambiguous | 0.5063 | ambiguous | 0.716 | Stabilizing | 0.826 | D | 0.425 | neutral | None | None | None | None | N |
D/S | 0.145 | likely_benign | 0.1672 | benign | 0.083 | Stabilizing | 0.404 | N | 0.358 | neutral | None | None | None | None | N |
D/T | 0.3787 | ambiguous | 0.4557 | ambiguous | 0.191 | Stabilizing | 0.404 | N | 0.427 | neutral | None | None | None | None | N |
D/V | 0.3946 | ambiguous | 0.5142 | ambiguous | 0.203 | Stabilizing | 0.879 | D | 0.471 | neutral | N | 0.479040289 | None | None | N |
D/W | 0.8957 | likely_pathogenic | 0.9258 | pathogenic | 0.049 | Stabilizing | 0.991 | D | 0.611 | neutral | None | None | None | None | N |
D/Y | 0.3336 | likely_benign | 0.3921 | ambiguous | 0.218 | Stabilizing | 0.957 | D | 0.471 | neutral | N | 0.503892494 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.