Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7097 | 21514;21515;21516 | chr2:178723970;178723969;178723968 | chr2:179588697;179588696;179588695 |
N2AB | 6780 | 20563;20564;20565 | chr2:178723970;178723969;178723968 | chr2:179588697;179588696;179588695 |
N2A | 5853 | 17782;17783;17784 | chr2:178723970;178723969;178723968 | chr2:179588697;179588696;179588695 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs773211607 | 0.003 | 0.822 | N | 0.581 | 0.29 | 0.139678290688 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
N/K | rs773211607 | 0.003 | 0.822 | N | 0.581 | 0.29 | 0.139678290688 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs773211607 | 0.003 | 0.822 | N | 0.581 | 0.29 | 0.139678290688 | gnomAD-4.0.0 | 2.47909E-06 | None | None | None | None | N | None | 0 | 1.66744E-05 | None | 0 | 2.22896E-05 | None | 0 | 0 | 0 | 0 | 3.20287E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3983 | ambiguous | 0.4285 | ambiguous | -0.855 | Destabilizing | 0.076 | N | 0.48 | neutral | None | None | None | None | N |
N/C | 0.5208 | ambiguous | 0.5502 | ambiguous | 0.025 | Stabilizing | 0.998 | D | 0.776 | deleterious | None | None | None | None | N |
N/D | 0.176 | likely_benign | 0.1832 | benign | -0.215 | Destabilizing | 0.822 | D | 0.561 | neutral | N | 0.485603878 | None | None | N |
N/E | 0.5985 | likely_pathogenic | 0.6314 | pathogenic | -0.115 | Destabilizing | 0.86 | D | 0.581 | neutral | None | None | None | None | N |
N/F | 0.7512 | likely_pathogenic | 0.7729 | pathogenic | -0.682 | Destabilizing | 0.978 | D | 0.785 | deleterious | None | None | None | None | N |
N/G | 0.3247 | likely_benign | 0.3176 | benign | -1.191 | Destabilizing | 0.86 | D | 0.526 | neutral | None | None | None | None | N |
N/H | 0.1598 | likely_benign | 0.1533 | benign | -0.88 | Destabilizing | 0.99 | D | 0.621 | neutral | D | 0.52780355 | None | None | N |
N/I | 0.5336 | ambiguous | 0.6188 | pathogenic | -0.003 | Destabilizing | 0.942 | D | 0.777 | deleterious | D | 0.536615414 | None | None | N |
N/K | 0.4887 | ambiguous | 0.5072 | ambiguous | -0.113 | Destabilizing | 0.822 | D | 0.581 | neutral | N | 0.507328984 | None | None | N |
N/L | 0.4494 | ambiguous | 0.5082 | ambiguous | -0.003 | Destabilizing | 0.754 | D | 0.705 | prob.neutral | None | None | None | None | N |
N/M | 0.5227 | ambiguous | 0.5659 | pathogenic | 0.341 | Stabilizing | 0.994 | D | 0.749 | deleterious | None | None | None | None | N |
N/P | 0.8444 | likely_pathogenic | 0.8929 | pathogenic | -0.257 | Destabilizing | 0.978 | D | 0.758 | deleterious | None | None | None | None | N |
N/Q | 0.5088 | ambiguous | 0.5217 | ambiguous | -0.673 | Destabilizing | 0.978 | D | 0.636 | neutral | None | None | None | None | N |
N/R | 0.4698 | ambiguous | 0.4857 | ambiguous | -0.17 | Destabilizing | 0.956 | D | 0.591 | neutral | None | None | None | None | N |
N/S | 0.1018 | likely_benign | 0.1067 | benign | -0.789 | Destabilizing | 0.489 | N | 0.561 | neutral | N | 0.493592822 | None | None | N |
N/T | 0.2236 | likely_benign | 0.2648 | benign | -0.484 | Destabilizing | 0.014 | N | 0.32 | neutral | N | 0.500051283 | None | None | N |
N/V | 0.5279 | ambiguous | 0.6121 | pathogenic | -0.257 | Destabilizing | 0.754 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/W | 0.8901 | likely_pathogenic | 0.8998 | pathogenic | -0.453 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
N/Y | 0.3008 | likely_benign | 0.3172 | benign | -0.234 | Destabilizing | 0.99 | D | 0.759 | deleterious | N | 0.516447244 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.