Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7099 | 21520;21521;21522 | chr2:178723964;178723963;178723962 | chr2:179588691;179588690;179588689 |
N2AB | 6782 | 20569;20570;20571 | chr2:178723964;178723963;178723962 | chr2:179588691;179588690;179588689 |
N2A | 5855 | 17788;17789;17790 | chr2:178723964;178723963;178723962 | chr2:179588691;179588690;179588689 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs2078895939 | None | 0.238 | N | 0.638 | 0.199 | 0.485420873983 | gnomAD-4.0.0 | 3.42161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52003E-05 | None | 0 | 0 | 3.59838E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6124 | likely_pathogenic | 0.6214 | pathogenic | -1.794 | Destabilizing | 0.055 | N | 0.335 | neutral | None | None | None | None | N |
C/D | 0.9883 | likely_pathogenic | 0.9919 | pathogenic | -1.433 | Destabilizing | 0.995 | D | 0.806 | deleterious | None | None | None | None | N |
C/E | 0.9928 | likely_pathogenic | 0.995 | pathogenic | -1.203 | Destabilizing | 0.984 | D | 0.795 | deleterious | None | None | None | None | N |
C/F | 0.564 | ambiguous | 0.6151 | pathogenic | -1.185 | Destabilizing | 0.921 | D | 0.777 | deleterious | N | 0.478970475 | None | None | N |
C/G | 0.4639 | ambiguous | 0.4956 | ambiguous | -2.16 | Highly Destabilizing | 0.906 | D | 0.733 | prob.delet. | N | 0.469983061 | None | None | N |
C/H | 0.9397 | likely_pathogenic | 0.9468 | pathogenic | -2.355 | Highly Destabilizing | 0.995 | D | 0.784 | deleterious | None | None | None | None | N |
C/I | 0.745 | likely_pathogenic | 0.8224 | pathogenic | -0.801 | Destabilizing | 0.984 | D | 0.755 | deleterious | None | None | None | None | N |
C/K | 0.9934 | likely_pathogenic | 0.9957 | pathogenic | -1.11 | Destabilizing | 0.984 | D | 0.791 | deleterious | None | None | None | None | N |
C/L | 0.7057 | likely_pathogenic | 0.7419 | pathogenic | -0.801 | Destabilizing | 0.927 | D | 0.701 | prob.neutral | None | None | None | None | N |
C/M | 0.8491 | likely_pathogenic | 0.8875 | pathogenic | 0.202 | Stabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
C/N | 0.9435 | likely_pathogenic | 0.956 | pathogenic | -1.689 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
C/P | 0.9917 | likely_pathogenic | 0.9946 | pathogenic | -1.109 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | N |
C/Q | 0.9702 | likely_pathogenic | 0.975 | pathogenic | -1.246 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
C/R | 0.9441 | likely_pathogenic | 0.9567 | pathogenic | -1.486 | Destabilizing | 0.994 | D | 0.812 | deleterious | N | 0.451840546 | None | None | N |
C/S | 0.6195 | likely_pathogenic | 0.6284 | pathogenic | -2.03 | Highly Destabilizing | 0.828 | D | 0.699 | prob.neutral | N | 0.464305095 | None | None | N |
C/T | 0.7884 | likely_pathogenic | 0.8417 | pathogenic | -1.607 | Destabilizing | 0.969 | D | 0.733 | prob.delet. | None | None | None | None | N |
C/V | 0.6405 | likely_pathogenic | 0.716 | pathogenic | -1.109 | Destabilizing | 0.927 | D | 0.709 | prob.delet. | None | None | None | None | N |
C/W | 0.906 | likely_pathogenic | 0.9229 | pathogenic | -1.523 | Destabilizing | 0.999 | D | 0.744 | deleterious | N | 0.480998391 | None | None | N |
C/Y | 0.7772 | likely_pathogenic | 0.787 | pathogenic | -1.353 | Destabilizing | 0.238 | N | 0.638 | neutral | N | 0.450016894 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.