Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7101 | 21526;21527;21528 | chr2:178723958;178723957;178723956 | chr2:179588685;179588684;179588683 |
N2AB | 6784 | 20575;20576;20577 | chr2:178723958;178723957;178723956 | chr2:179588685;179588684;179588683 |
N2A | 5857 | 17794;17795;17796 | chr2:178723958;178723957;178723956 | chr2:179588685;179588684;179588683 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 1.0 | D | 0.873 | 0.772 | 0.898077514524 | gnomAD-4.0.0 | 1.59191E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9093 | likely_pathogenic | 0.9111 | pathogenic | -2.312 | Highly Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
L/C | 0.9177 | likely_pathogenic | 0.9326 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -3.102 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/E | 0.994 | likely_pathogenic | 0.9937 | pathogenic | -2.771 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/F | 0.5245 | ambiguous | 0.4966 | ambiguous | -1.413 | Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.541942375 | None | None | N |
L/G | 0.9819 | likely_pathogenic | 0.981 | pathogenic | -2.921 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/H | 0.9767 | likely_pathogenic | 0.9762 | pathogenic | -2.849 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/I | 0.2289 | likely_benign | 0.2305 | benign | -0.475 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/K | 0.9904 | likely_pathogenic | 0.9889 | pathogenic | -1.664 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/M | 0.2975 | likely_benign | 0.3175 | benign | -0.721 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.539322256 | None | None | N |
L/N | 0.9947 | likely_pathogenic | 0.9943 | pathogenic | -2.426 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
L/P | 0.9964 | likely_pathogenic | 0.9954 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
L/Q | 0.9648 | likely_pathogenic | 0.9627 | pathogenic | -2.014 | Highly Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
L/R | 0.9717 | likely_pathogenic | 0.9673 | pathogenic | -1.947 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/S | 0.9805 | likely_pathogenic | 0.981 | pathogenic | -2.924 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.588572593 | None | None | N |
L/T | 0.957 | likely_pathogenic | 0.9596 | pathogenic | -2.419 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/V | 0.251 | likely_benign | 0.2698 | benign | -1.079 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | D | 0.54877923 | None | None | N |
L/W | 0.9323 | likely_pathogenic | 0.9289 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.588572593 | None | None | N |
L/Y | 0.9444 | likely_pathogenic | 0.9426 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.