Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7105 | 21538;21539;21540 | chr2:178723946;178723945;178723944 | chr2:179588673;179588672;179588671 |
N2AB | 6788 | 20587;20588;20589 | chr2:178723946;178723945;178723944 | chr2:179588673;179588672;179588671 |
N2A | 5861 | 17806;17807;17808 | chr2:178723946;178723945;178723944 | chr2:179588673;179588672;179588671 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.272 | N | 0.491 | 0.176 | 0.337378238328 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0732 | likely_benign | 0.0726 | benign | -0.551 | Destabilizing | 0.081 | N | 0.337 | neutral | N | 0.477181179 | None | None | N |
S/C | 0.1188 | likely_benign | 0.1111 | benign | -0.259 | Destabilizing | 0.002 | N | 0.259 | neutral | N | 0.47509027 | None | None | N |
S/D | 0.1803 | likely_benign | 0.172 | benign | -0.183 | Destabilizing | 0.001 | N | 0.136 | neutral | None | None | None | None | N |
S/E | 0.3002 | likely_benign | 0.2898 | benign | -0.262 | Destabilizing | 0.124 | N | 0.309 | neutral | None | None | None | None | N |
S/F | 0.1101 | likely_benign | 0.1057 | benign | -1.147 | Destabilizing | 0.002 | N | 0.302 | neutral | N | 0.47483678 | None | None | N |
S/G | 0.0878 | likely_benign | 0.0853 | benign | -0.683 | Destabilizing | 0.055 | N | 0.345 | neutral | None | None | None | None | N |
S/H | 0.195 | likely_benign | 0.1796 | benign | -1.296 | Destabilizing | 0.667 | D | 0.429 | neutral | None | None | None | None | N |
S/I | 0.1382 | likely_benign | 0.1274 | benign | -0.324 | Destabilizing | 0.124 | N | 0.473 | neutral | None | None | None | None | N |
S/K | 0.3991 | ambiguous | 0.371 | ambiguous | -0.498 | Destabilizing | 0.22 | N | 0.32 | neutral | None | None | None | None | N |
S/L | 0.0836 | likely_benign | 0.0834 | benign | -0.324 | Destabilizing | 0.055 | N | 0.473 | neutral | None | None | None | None | N |
S/M | 0.1624 | likely_benign | 0.1555 | benign | 0.192 | Stabilizing | 0.667 | D | 0.422 | neutral | None | None | None | None | N |
S/N | 0.1009 | likely_benign | 0.094 | benign | -0.281 | Destabilizing | None | N | 0.109 | neutral | None | None | None | None | N |
S/P | 0.3967 | ambiguous | 0.3799 | ambiguous | -0.371 | Destabilizing | 0.822 | D | 0.453 | neutral | N | 0.492265275 | None | None | N |
S/Q | 0.3207 | likely_benign | 0.2992 | benign | -0.602 | Destabilizing | 0.667 | D | 0.383 | neutral | None | None | None | None | N |
S/R | 0.2982 | likely_benign | 0.2786 | benign | -0.277 | Destabilizing | 0.497 | N | 0.471 | neutral | None | None | None | None | N |
S/T | 0.0837 | likely_benign | 0.0815 | benign | -0.372 | Destabilizing | 0.003 | N | 0.143 | neutral | N | 0.450322652 | None | None | N |
S/V | 0.1408 | likely_benign | 0.1325 | benign | -0.371 | Destabilizing | 0.124 | N | 0.487 | neutral | None | None | None | None | N |
S/W | 0.2039 | likely_benign | 0.2001 | benign | -1.112 | Destabilizing | 0.883 | D | 0.474 | neutral | None | None | None | None | N |
S/Y | 0.0984 | likely_benign | 0.0931 | benign | -0.837 | Destabilizing | 0.272 | N | 0.491 | neutral | N | 0.4661895 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.