Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7114 | 21565;21566;21567 | chr2:178723919;178723918;178723917 | chr2:179588646;179588645;179588644 |
N2AB | 6797 | 20614;20615;20616 | chr2:178723919;178723918;178723917 | chr2:179588646;179588645;179588644 |
N2A | 5870 | 17833;17834;17835 | chr2:178723919;178723918;178723917 | chr2:179588646;179588645;179588644 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs754909782 | -2.887 | 1.0 | D | 0.789 | 0.765 | 0.770276685214 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.3077E-04 | None | 0 | 0 | 0 |
Y/H | rs754909782 | -2.887 | 1.0 | D | 0.789 | 0.765 | 0.770276685214 | gnomAD-4.0.0 | 3.42176E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.79791E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9788 | likely_pathogenic | 0.9734 | pathogenic | -2.742 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Y/C | 0.782 | likely_pathogenic | 0.7445 | pathogenic | -2.177 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.671067909 | None | None | N |
Y/D | 0.9901 | likely_pathogenic | 0.9886 | pathogenic | -3.575 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.671067909 | None | None | N |
Y/E | 0.9965 | likely_pathogenic | 0.9959 | pathogenic | -3.341 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/F | 0.1304 | likely_benign | 0.1223 | benign | -1.052 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | D | 0.564838298 | None | None | N |
Y/G | 0.9752 | likely_pathogenic | 0.9723 | pathogenic | -3.188 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/H | 0.9076 | likely_pathogenic | 0.9033 | pathogenic | -2.33 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | D | 0.670866105 | None | None | N |
Y/I | 0.7587 | likely_pathogenic | 0.7063 | pathogenic | -1.251 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/K | 0.9942 | likely_pathogenic | 0.9937 | pathogenic | -2.333 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/L | 0.7387 | likely_pathogenic | 0.7056 | pathogenic | -1.251 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
Y/M | 0.9315 | likely_pathogenic | 0.9176 | pathogenic | -1.326 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Y/N | 0.9506 | likely_pathogenic | 0.9445 | pathogenic | -3.281 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.671067909 | None | None | N |
Y/P | 0.9956 | likely_pathogenic | 0.995 | pathogenic | -1.766 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
Y/Q | 0.9924 | likely_pathogenic | 0.9912 | pathogenic | -2.894 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Y/R | 0.9796 | likely_pathogenic | 0.9784 | pathogenic | -2.401 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/S | 0.9508 | likely_pathogenic | 0.9451 | pathogenic | -3.572 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.671067909 | None | None | N |
Y/T | 0.9727 | likely_pathogenic | 0.966 | pathogenic | -3.196 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
Y/V | 0.6945 | likely_pathogenic | 0.6306 | pathogenic | -1.766 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/W | 0.7897 | likely_pathogenic | 0.7768 | pathogenic | -0.449 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.