Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7119 | 21580;21581;21582 | chr2:178723904;178723903;178723902 | chr2:179588631;179588630;179588629 |
N2AB | 6802 | 20629;20630;20631 | chr2:178723904;178723903;178723902 | chr2:179588631;179588630;179588629 |
N2A | 5875 | 17848;17849;17850 | chr2:178723904;178723903;178723902 | chr2:179588631;179588630;179588629 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1254360704 | -0.511 | 0.022 | N | 0.116 | 0.19 | 0.233150807113 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
A/T | rs1254360704 | -0.511 | 0.022 | N | 0.116 | 0.19 | 0.233150807113 | gnomAD-4.0.0 | 1.59262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86118E-06 | 0 | 0 |
A/V | None | None | 0.051 | N | 0.273 | 0.237 | 0.410469974859 | gnomAD-4.0.0 | 1.59253E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02608E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.553 | ambiguous | 0.5161 | ambiguous | -1.022 | Destabilizing | 0.998 | D | 0.487 | neutral | None | None | None | None | N |
A/D | 0.2966 | likely_benign | 0.2698 | benign | -0.961 | Destabilizing | 0.801 | D | 0.547 | neutral | N | 0.499600331 | None | None | N |
A/E | 0.2274 | likely_benign | 0.2038 | benign | -1.08 | Destabilizing | 0.842 | D | 0.473 | neutral | None | None | None | None | N |
A/F | 0.3495 | ambiguous | 0.3184 | benign | -1.276 | Destabilizing | 0.974 | D | 0.579 | neutral | None | None | None | None | N |
A/G | 0.1742 | likely_benign | 0.1654 | benign | -0.858 | Destabilizing | 0.454 | N | 0.377 | neutral | N | 0.512606914 | None | None | N |
A/H | 0.4647 | ambiguous | 0.4233 | ambiguous | -0.859 | Destabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | N |
A/I | 0.2878 | likely_benign | 0.256 | benign | -0.615 | Destabilizing | 0.728 | D | 0.481 | neutral | None | None | None | None | N |
A/K | 0.3875 | ambiguous | 0.3429 | ambiguous | -0.869 | Destabilizing | 0.067 | N | 0.305 | neutral | None | None | None | None | N |
A/L | 0.2255 | likely_benign | 0.2126 | benign | -0.615 | Destabilizing | 0.525 | D | 0.458 | neutral | None | None | None | None | N |
A/M | 0.2396 | likely_benign | 0.2209 | benign | -0.488 | Destabilizing | 0.974 | D | 0.477 | neutral | None | None | None | None | N |
A/N | 0.2587 | likely_benign | 0.2359 | benign | -0.616 | Destabilizing | 0.842 | D | 0.545 | neutral | None | None | None | None | N |
A/P | 0.8882 | likely_pathogenic | 0.8797 | pathogenic | -0.622 | Destabilizing | 0.966 | D | 0.451 | neutral | N | 0.513306919 | None | None | N |
A/Q | 0.3141 | likely_benign | 0.289 | benign | -0.934 | Destabilizing | 0.949 | D | 0.457 | neutral | None | None | None | None | N |
A/R | 0.3121 | likely_benign | 0.2812 | benign | -0.404 | Destabilizing | 0.142 | N | 0.316 | neutral | None | None | None | None | N |
A/S | 0.0876 | likely_benign | 0.085 | benign | -0.886 | Destabilizing | 0.051 | N | 0.207 | neutral | N | 0.396395819 | None | None | N |
A/T | 0.0744 | likely_benign | 0.0719 | benign | -0.928 | Destabilizing | 0.022 | N | 0.116 | neutral | N | 0.40301236 | None | None | N |
A/V | 0.1417 | likely_benign | 0.1291 | benign | -0.622 | Destabilizing | 0.051 | N | 0.273 | neutral | N | 0.443669691 | None | None | N |
A/W | 0.7152 | likely_pathogenic | 0.6674 | pathogenic | -1.404 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
A/Y | 0.4682 | ambiguous | 0.4212 | ambiguous | -1.043 | Destabilizing | 0.991 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.