Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7124 | 21595;21596;21597 | chr2:178723889;178723888;178723887 | chr2:179588616;179588615;179588614 |
N2AB | 6807 | 20644;20645;20646 | chr2:178723889;178723888;178723887 | chr2:179588616;179588615;179588614 |
N2A | 5880 | 17863;17864;17865 | chr2:178723889;178723888;178723887 | chr2:179588616;179588615;179588614 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.01 | N | 0.112 | 0.208 | 0.162503812791 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1081 | likely_benign | 0.1012 | benign | -0.416 | Destabilizing | 0.01 | N | 0.125 | neutral | D | 0.522399833 | None | None | I |
S/C | 0.2197 | likely_benign | 0.1958 | benign | -0.341 | Destabilizing | 0.013 | N | 0.283 | neutral | D | 0.535325195 | None | None | I |
S/D | 0.4378 | ambiguous | 0.3833 | ambiguous | -0.114 | Destabilizing | 0.704 | D | 0.287 | neutral | None | None | None | None | I |
S/E | 0.4791 | ambiguous | 0.4091 | ambiguous | -0.205 | Destabilizing | 0.543 | D | 0.263 | neutral | None | None | None | None | I |
S/F | 0.2196 | likely_benign | 0.1782 | benign | -0.935 | Destabilizing | 0.975 | D | 0.578 | neutral | N | 0.504547961 | None | None | I |
S/G | 0.1374 | likely_benign | 0.1311 | benign | -0.545 | Destabilizing | 0.329 | N | 0.293 | neutral | None | None | None | None | I |
S/H | 0.349 | ambiguous | 0.2763 | benign | -1.054 | Destabilizing | 0.981 | D | 0.499 | neutral | None | None | None | None | I |
S/I | 0.2301 | likely_benign | 0.1886 | benign | -0.205 | Destabilizing | 0.704 | D | 0.537 | neutral | None | None | None | None | I |
S/K | 0.5494 | ambiguous | 0.4476 | ambiguous | -0.637 | Destabilizing | 0.007 | N | 0.147 | neutral | None | None | None | None | I |
S/L | 0.1363 | likely_benign | 0.1197 | benign | -0.205 | Destabilizing | 0.495 | N | 0.537 | neutral | None | None | None | None | I |
S/M | 0.2439 | likely_benign | 0.2241 | benign | 0.089 | Stabilizing | 0.981 | D | 0.501 | neutral | None | None | None | None | I |
S/N | 0.1561 | likely_benign | 0.1335 | benign | -0.364 | Destabilizing | 0.704 | D | 0.325 | neutral | None | None | None | None | I |
S/P | 0.8111 | likely_pathogenic | 0.753 | pathogenic | -0.246 | Destabilizing | 0.784 | D | 0.485 | neutral | N | 0.520094549 | None | None | I |
S/Q | 0.4475 | ambiguous | 0.3788 | ambiguous | -0.649 | Destabilizing | 0.893 | D | 0.413 | neutral | None | None | None | None | I |
S/R | 0.4152 | ambiguous | 0.3213 | benign | -0.373 | Destabilizing | 0.543 | D | 0.483 | neutral | None | None | None | None | I |
S/T | 0.0994 | likely_benign | 0.0894 | benign | -0.457 | Destabilizing | 0.01 | N | 0.112 | neutral | N | 0.484593594 | None | None | I |
S/V | 0.252 | likely_benign | 0.2134 | benign | -0.246 | Destabilizing | 0.704 | D | 0.526 | neutral | None | None | None | None | I |
S/W | 0.3573 | ambiguous | 0.301 | benign | -0.923 | Destabilizing | 0.995 | D | 0.596 | neutral | None | None | None | None | I |
S/Y | 0.2094 | likely_benign | 0.1728 | benign | -0.663 | Destabilizing | 0.975 | D | 0.567 | neutral | N | 0.510384085 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.