Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7125 | 21598;21599;21600 | chr2:178723886;178723885;178723884 | chr2:179588613;179588612;179588611 |
N2AB | 6808 | 20647;20648;20649 | chr2:178723886;178723885;178723884 | chr2:179588613;179588612;179588611 |
N2A | 5881 | 17866;17867;17868 | chr2:178723886;178723885;178723884 | chr2:179588613;179588612;179588611 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.999 | N | 0.596 | 0.371 | 0.423954403188 | gnomAD-4.0.0 | 1.59427E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86475E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.191 | likely_benign | 0.1801 | benign | -0.704 | Destabilizing | 0.98 | D | 0.682 | prob.neutral | N | 0.443378902 | None | None | I |
D/C | 0.8165 | likely_pathogenic | 0.7784 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
D/E | 0.3058 | likely_benign | 0.2891 | benign | -0.63 | Destabilizing | 0.997 | D | 0.511 | neutral | N | 0.491858075 | None | None | I |
D/F | 0.832 | likely_pathogenic | 0.7959 | pathogenic | -0.302 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | I |
D/G | 0.2494 | likely_benign | 0.2297 | benign | -1.047 | Destabilizing | 0.997 | D | 0.645 | neutral | N | 0.514307651 | None | None | I |
D/H | 0.4927 | ambiguous | 0.4263 | ambiguous | -0.54 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.520891016 | None | None | I |
D/I | 0.6761 | likely_pathogenic | 0.6349 | pathogenic | 0.202 | Stabilizing | 0.971 | D | 0.746 | deleterious | None | None | None | None | I |
D/K | 0.5541 | ambiguous | 0.5004 | ambiguous | -0.193 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
D/L | 0.6704 | likely_pathogenic | 0.6349 | pathogenic | 0.202 | Stabilizing | 0.971 | D | 0.743 | deleterious | None | None | None | None | I |
D/M | 0.827 | likely_pathogenic | 0.8039 | pathogenic | 0.634 | Stabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | I |
D/N | 0.1497 | likely_benign | 0.1319 | benign | -0.665 | Destabilizing | 0.999 | D | 0.596 | neutral | N | 0.496999863 | None | None | I |
D/P | 0.9796 | likely_pathogenic | 0.9729 | pathogenic | -0.076 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/Q | 0.5303 | ambiguous | 0.4788 | ambiguous | -0.561 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | I |
D/R | 0.5662 | likely_pathogenic | 0.5062 | ambiguous | -0.042 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | I |
D/S | 0.1333 | likely_benign | 0.1195 | benign | -0.934 | Destabilizing | 0.993 | D | 0.579 | neutral | None | None | None | None | I |
D/T | 0.3829 | ambiguous | 0.3491 | ambiguous | -0.646 | Destabilizing | 0.985 | D | 0.647 | neutral | None | None | None | None | I |
D/V | 0.4097 | ambiguous | 0.372 | ambiguous | -0.076 | Destabilizing | 0.219 | N | 0.515 | neutral | N | 0.493018289 | None | None | I |
D/W | 0.9694 | likely_pathogenic | 0.9586 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
D/Y | 0.4987 | ambiguous | 0.4307 | ambiguous | -0.02 | Destabilizing | 0.999 | D | 0.821 | deleterious | D | 0.532665395 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.