Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7126 | 21601;21602;21603 | chr2:178723883;178723882;178723881 | chr2:179588610;179588609;179588608 |
N2AB | 6809 | 20650;20651;20652 | chr2:178723883;178723882;178723881 | chr2:179588610;179588609;179588608 |
N2A | 5882 | 17869;17870;17871 | chr2:178723883;178723882;178723881 | chr2:179588610;179588609;179588608 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs761736630 | -0.535 | 0.98 | N | 0.565 | 0.499 | 0.544128928594 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.05044E-04 | None | 0 | None | 0 | 0 | 0 |
E/A | rs761736630 | -0.535 | 0.98 | N | 0.565 | 0.499 | 0.544128928594 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.92753E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/A | rs761736630 | -0.535 | 0.98 | N | 0.565 | 0.499 | 0.544128928594 | gnomAD-4.0.0 | 3.10105E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 8.91981E-05 | None | 0 | 0 | 8.4827E-07 | 0 | 0 |
E/D | rs786205315 | None | 0.953 | N | 0.493 | 0.493 | 0.271763555656 | gnomAD-4.0.0 | 6.84861E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00233E-07 | 0 | 0 |
E/K | None | None | 0.4 | N | 0.209 | 0.376 | 0.347659731818 | gnomAD-4.0.0 | 6.84791E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00114E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1662 | likely_benign | 0.1598 | benign | -0.911 | Destabilizing | 0.98 | D | 0.565 | neutral | N | 0.498902875 | None | None | I |
E/C | 0.9206 | likely_pathogenic | 0.8995 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/D | 0.2113 | likely_benign | 0.1954 | benign | -0.84 | Destabilizing | 0.953 | D | 0.493 | neutral | N | 0.495459835 | None | None | I |
E/F | 0.7951 | likely_pathogenic | 0.7502 | pathogenic | -0.387 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/G | 0.2493 | likely_benign | 0.238 | benign | -1.228 | Destabilizing | 0.99 | D | 0.594 | neutral | D | 0.532922566 | None | None | I |
E/H | 0.5208 | ambiguous | 0.4564 | ambiguous | -0.456 | Destabilizing | 0.998 | D | 0.56 | neutral | None | None | None | None | I |
E/I | 0.4464 | ambiguous | 0.3906 | ambiguous | -0.058 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | I |
E/K | 0.1575 | likely_benign | 0.1395 | benign | -0.303 | Destabilizing | 0.4 | N | 0.209 | neutral | N | 0.501661125 | None | None | I |
E/L | 0.575 | likely_pathogenic | 0.517 | ambiguous | -0.058 | Destabilizing | 0.985 | D | 0.629 | neutral | None | None | None | None | I |
E/M | 0.5404 | ambiguous | 0.4982 | ambiguous | 0.296 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/N | 0.3662 | ambiguous | 0.3301 | benign | -0.808 | Destabilizing | 0.993 | D | 0.514 | neutral | None | None | None | None | I |
E/P | 0.9491 | likely_pathogenic | 0.9214 | pathogenic | -0.322 | Destabilizing | 0.999 | D | 0.642 | neutral | None | None | None | None | I |
E/Q | 0.1599 | likely_benign | 0.145 | benign | -0.715 | Destabilizing | 0.659 | D | 0.162 | neutral | N | 0.505625014 | None | None | I |
E/R | 0.2912 | likely_benign | 0.2465 | benign | 0.009 | Stabilizing | 0.971 | D | 0.477 | neutral | None | None | None | None | I |
E/S | 0.2099 | likely_benign | 0.1984 | benign | -1.056 | Destabilizing | 0.985 | D | 0.513 | neutral | None | None | None | None | I |
E/T | 0.2179 | likely_benign | 0.1889 | benign | -0.791 | Destabilizing | 0.993 | D | 0.589 | neutral | None | None | None | None | I |
E/V | 0.2591 | likely_benign | 0.227 | benign | -0.322 | Destabilizing | 0.997 | D | 0.622 | neutral | N | 0.507576609 | None | None | I |
E/W | 0.9372 | likely_pathogenic | 0.9152 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
E/Y | 0.6943 | likely_pathogenic | 0.6315 | pathogenic | -0.112 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.