Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7127 | 21604;21605;21606 | chr2:178723880;178723879;178723878 | chr2:179588607;179588606;179588605 |
N2AB | 6810 | 20653;20654;20655 | chr2:178723880;178723879;178723878 | chr2:179588607;179588606;179588605 |
N2A | 5883 | 17872;17873;17874 | chr2:178723880;178723879;178723878 | chr2:179588607;179588606;179588605 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | None | None | 0.028 | N | 0.675 | 0.315 | 0.742840689568 | gnomAD-4.0.0 | 1.44039E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.575E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.6402 | likely_pathogenic | 0.6015 | pathogenic | -1.924 | Destabilizing | 0.525 | D | 0.654 | neutral | None | None | None | None | N |
C/D | 0.8943 | likely_pathogenic | 0.8639 | pathogenic | -1.314 | Destabilizing | 0.949 | D | 0.809 | deleterious | None | None | None | None | N |
C/E | 0.9647 | likely_pathogenic | 0.9546 | pathogenic | -1.155 | Destabilizing | 0.949 | D | 0.807 | deleterious | None | None | None | None | N |
C/F | 0.7063 | likely_pathogenic | 0.6727 | pathogenic | -1.16 | Destabilizing | 0.966 | D | 0.791 | deleterious | N | 0.498138725 | None | None | N |
C/G | 0.3549 | ambiguous | 0.3159 | benign | -2.258 | Highly Destabilizing | 0.801 | D | 0.792 | deleterious | N | 0.495834547 | None | None | N |
C/H | 0.9318 | likely_pathogenic | 0.917 | pathogenic | -2.342 | Highly Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
C/I | 0.8523 | likely_pathogenic | 0.8384 | pathogenic | -1.038 | Destabilizing | 0.949 | D | 0.805 | deleterious | None | None | None | None | N |
C/K | 0.9878 | likely_pathogenic | 0.984 | pathogenic | -1.547 | Destabilizing | 0.728 | D | 0.788 | deleterious | None | None | None | None | N |
C/L | 0.8133 | likely_pathogenic | 0.7892 | pathogenic | -1.038 | Destabilizing | 0.728 | D | 0.709 | prob.delet. | None | None | None | None | N |
C/M | 0.855 | likely_pathogenic | 0.8307 | pathogenic | 0.008 | Stabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | N |
C/N | 0.7957 | likely_pathogenic | 0.7516 | pathogenic | -1.725 | Destabilizing | 0.949 | D | 0.808 | deleterious | None | None | None | None | N |
C/P | 0.9973 | likely_pathogenic | 0.9964 | pathogenic | -1.31 | Destabilizing | 0.974 | D | 0.827 | deleterious | None | None | None | None | N |
C/Q | 0.948 | likely_pathogenic | 0.9344 | pathogenic | -1.504 | Destabilizing | 0.949 | D | 0.829 | deleterious | None | None | None | None | N |
C/R | 0.9374 | likely_pathogenic | 0.9243 | pathogenic | -1.536 | Destabilizing | 0.028 | N | 0.675 | neutral | N | 0.484705278 | None | None | N |
C/S | 0.4078 | ambiguous | 0.3547 | ambiguous | -2.178 | Highly Destabilizing | 0.669 | D | 0.738 | prob.delet. | N | 0.480915783 | None | None | N |
C/T | 0.4803 | ambiguous | 0.4457 | ambiguous | -1.848 | Destabilizing | 0.067 | N | 0.52 | neutral | None | None | None | None | N |
C/V | 0.726 | likely_pathogenic | 0.7067 | pathogenic | -1.31 | Destabilizing | 0.728 | D | 0.731 | prob.delet. | None | None | None | None | N |
C/W | 0.9206 | likely_pathogenic | 0.9039 | pathogenic | -1.354 | Destabilizing | 0.997 | D | 0.769 | deleterious | N | 0.512724261 | None | None | N |
C/Y | 0.8241 | likely_pathogenic | 0.7914 | pathogenic | -1.287 | Destabilizing | 0.989 | D | 0.784 | deleterious | N | 0.498392215 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.