Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7129 | 21610;21611;21612 | chr2:178723874;178723873;178723872 | chr2:179588601;179588600;179588599 |
N2AB | 6812 | 20659;20660;20661 | chr2:178723874;178723873;178723872 | chr2:179588601;179588600;179588599 |
N2A | 5885 | 17878;17879;17880 | chr2:178723874;178723873;178723872 | chr2:179588601;179588600;179588599 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.989 | N | 0.613 | 0.432 | 0.432716982437 | gnomAD-4.0.0 | 2.74159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70243E-06 | 1.16382E-05 | 0 |
A/V | rs2078875865 | None | 0.996 | N | 0.609 | 0.391 | 0.5578725173 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/V | rs2078875865 | None | 0.996 | N | 0.609 | 0.391 | 0.5578725173 | gnomAD-4.0.0 | 2.48254E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39512E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8415 | likely_pathogenic | 0.8251 | pathogenic | -1.269 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
A/D | 0.8216 | likely_pathogenic | 0.7906 | pathogenic | -1.491 | Destabilizing | 0.296 | N | 0.561 | neutral | None | None | None | None | N |
A/E | 0.871 | likely_pathogenic | 0.8389 | pathogenic | -1.485 | Destabilizing | 0.956 | D | 0.693 | prob.neutral | D | 0.56563881 | None | None | N |
A/F | 0.8795 | likely_pathogenic | 0.8428 | pathogenic | -1.125 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
A/G | 0.1775 | likely_benign | 0.1653 | benign | -1.334 | Destabilizing | 0.121 | N | 0.318 | neutral | D | 0.532024968 | None | None | N |
A/H | 0.9589 | likely_pathogenic | 0.948 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/I | 0.7675 | likely_pathogenic | 0.7425 | pathogenic | -0.38 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/K | 0.9725 | likely_pathogenic | 0.9647 | pathogenic | -1.202 | Destabilizing | 0.995 | D | 0.718 | prob.delet. | None | None | None | None | N |
A/L | 0.6548 | likely_pathogenic | 0.6276 | pathogenic | -0.38 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | N |
A/M | 0.6358 | likely_pathogenic | 0.6094 | pathogenic | -0.44 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/N | 0.828 | likely_pathogenic | 0.794 | pathogenic | -1.069 | Destabilizing | 0.995 | D | 0.754 | deleterious | None | None | None | None | N |
A/P | 0.9719 | likely_pathogenic | 0.9681 | pathogenic | -0.559 | Destabilizing | 0.999 | D | 0.746 | deleterious | D | 0.554535994 | None | None | N |
A/Q | 0.9153 | likely_pathogenic | 0.8972 | pathogenic | -1.199 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/R | 0.9442 | likely_pathogenic | 0.9306 | pathogenic | -0.936 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/S | 0.1776 | likely_benign | 0.1689 | benign | -1.478 | Destabilizing | 0.978 | D | 0.514 | neutral | N | 0.4934356 | None | None | N |
A/T | 0.2225 | likely_benign | 0.2065 | benign | -1.369 | Destabilizing | 0.989 | D | 0.613 | neutral | N | 0.504703 | None | None | N |
A/V | 0.4066 | ambiguous | 0.3866 | ambiguous | -0.559 | Destabilizing | 0.996 | D | 0.609 | neutral | N | 0.484277659 | None | None | N |
A/W | 0.9847 | likely_pathogenic | 0.9796 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
A/Y | 0.9396 | likely_pathogenic | 0.9181 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.