Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7132 | 21619;21620;21621 | chr2:178723865;178723864;178723863 | chr2:179588592;179588591;179588590 |
N2AB | 6815 | 20668;20669;20670 | chr2:178723865;178723864;178723863 | chr2:179588592;179588591;179588590 |
N2A | 5888 | 17887;17888;17889 | chr2:178723865;178723864;178723863 | chr2:179588592;179588591;179588590 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1450786655 | None | None | N | 0.099 | 0.184 | 0.207176502487 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88018E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs1450786655 | None | None | N | 0.099 | 0.184 | 0.207176502487 | gnomAD-4.0.0 | 1.03036E-05 | None | None | None | None | N | None | 0 | 0 | None | 2.8866E-04 | 0 | None | 0 | 0 | 2.40963E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.076 | likely_benign | 0.0752 | benign | -0.717 | Destabilizing | None | N | 0.099 | neutral | N | 0.500545035 | None | None | N |
T/C | 0.3778 | ambiguous | 0.41 | ambiguous | -0.405 | Destabilizing | 0.824 | D | 0.411 | neutral | None | None | None | None | N |
T/D | 0.2049 | likely_benign | 0.2028 | benign | 0.01 | Stabilizing | 0.38 | N | 0.405 | neutral | None | None | None | None | N |
T/E | 0.1806 | likely_benign | 0.1762 | benign | -0.015 | Destabilizing | 0.149 | N | 0.389 | neutral | None | None | None | None | N |
T/F | 0.1448 | likely_benign | 0.1456 | benign | -0.906 | Destabilizing | None | N | 0.225 | neutral | None | None | None | None | N |
T/G | 0.2199 | likely_benign | 0.2251 | benign | -0.942 | Destabilizing | 0.081 | N | 0.416 | neutral | None | None | None | None | N |
T/H | 0.1562 | likely_benign | 0.1578 | benign | -1.266 | Destabilizing | 0.935 | D | 0.431 | neutral | None | None | None | None | N |
T/I | 0.1153 | likely_benign | 0.118 | benign | -0.218 | Destabilizing | 0.062 | N | 0.365 | neutral | N | 0.5147245 | None | None | N |
T/K | 0.1564 | likely_benign | 0.1507 | benign | -0.591 | Destabilizing | 0.149 | N | 0.383 | neutral | None | None | None | None | N |
T/L | 0.0803 | likely_benign | 0.0815 | benign | -0.218 | Destabilizing | 0.001 | N | 0.169 | neutral | None | None | None | None | N |
T/M | 0.0761 | likely_benign | 0.0779 | benign | 0.076 | Stabilizing | 0.38 | N | 0.427 | neutral | None | None | None | None | N |
T/N | 0.0881 | likely_benign | 0.0893 | benign | -0.442 | Destabilizing | 0.484 | N | 0.371 | neutral | N | 0.501717917 | None | None | N |
T/P | 0.204 | likely_benign | 0.1968 | benign | -0.353 | Destabilizing | 0.317 | N | 0.44 | neutral | D | 0.543896796 | None | None | N |
T/Q | 0.1636 | likely_benign | 0.1598 | benign | -0.649 | Destabilizing | 0.555 | D | 0.443 | neutral | None | None | None | None | N |
T/R | 0.1125 | likely_benign | 0.1122 | benign | -0.36 | Destabilizing | 0.38 | N | 0.44 | neutral | None | None | None | None | N |
T/S | 0.089 | likely_benign | 0.0892 | benign | -0.735 | Destabilizing | 0.027 | N | 0.279 | neutral | N | 0.519244885 | None | None | N |
T/V | 0.1095 | likely_benign | 0.1115 | benign | -0.353 | Destabilizing | 0.035 | N | 0.281 | neutral | None | None | None | None | N |
T/W | 0.3527 | ambiguous | 0.3596 | ambiguous | -0.828 | Destabilizing | 0.935 | D | 0.437 | neutral | None | None | None | None | N |
T/Y | 0.1731 | likely_benign | 0.1732 | benign | -0.59 | Destabilizing | 0.235 | N | 0.428 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.