Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7133 | 21622;21623;21624 | chr2:178723862;178723861;178723860 | chr2:179588589;179588588;179588587 |
N2AB | 6816 | 20671;20672;20673 | chr2:178723862;178723861;178723860 | chr2:179588589;179588588;179588587 |
N2A | 5889 | 17890;17891;17892 | chr2:178723862;178723861;178723860 | chr2:179588589;179588588;179588587 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2078874176 | None | 0.645 | D | 0.545 | 0.622 | 0.787508662514 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs2078874176 | None | 0.645 | D | 0.545 | 0.622 | 0.787508662514 | gnomAD-4.0.0 | 1.8687E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.5557E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.533 | ambiguous | 0.4916 | ambiguous | -1.685 | Destabilizing | 0.645 | D | 0.545 | neutral | D | 0.653575198 | None | None | N |
V/C | 0.9356 | likely_pathogenic | 0.9247 | pathogenic | -1.233 | Destabilizing | 0.995 | D | 0.629 | neutral | None | None | None | None | N |
V/D | 0.9653 | likely_pathogenic | 0.9481 | pathogenic | -1.564 | Destabilizing | 0.945 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/E | 0.9014 | likely_pathogenic | 0.8737 | pathogenic | -1.537 | Destabilizing | 0.928 | D | 0.653 | neutral | D | 0.65418061 | None | None | N |
V/F | 0.4706 | ambiguous | 0.4348 | ambiguous | -1.264 | Destabilizing | 0.894 | D | 0.621 | neutral | None | None | None | None | N |
V/G | 0.7297 | likely_pathogenic | 0.6696 | pathogenic | -2.031 | Highly Destabilizing | 0.928 | D | 0.668 | neutral | D | 0.65418061 | None | None | N |
V/H | 0.9665 | likely_pathogenic | 0.9563 | pathogenic | -1.53 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/I | 0.0761 | likely_benign | 0.0752 | benign | -0.815 | Destabilizing | 0.006 | N | 0.467 | neutral | N | 0.519082088 | None | None | N |
V/K | 0.9177 | likely_pathogenic | 0.8898 | pathogenic | -1.272 | Destabilizing | 0.945 | D | 0.651 | neutral | None | None | None | None | N |
V/L | 0.2977 | likely_benign | 0.2843 | benign | -0.815 | Destabilizing | 0.006 | N | 0.455 | neutral | D | 0.593748157 | None | None | N |
V/M | 0.3005 | likely_benign | 0.2879 | benign | -0.698 | Destabilizing | 0.894 | D | 0.635 | neutral | None | None | None | None | N |
V/N | 0.887 | likely_pathogenic | 0.8514 | pathogenic | -1.118 | Destabilizing | 0.981 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/P | 0.8583 | likely_pathogenic | 0.8243 | pathogenic | -1.072 | Destabilizing | 0.981 | D | 0.659 | neutral | None | None | None | None | N |
V/Q | 0.9004 | likely_pathogenic | 0.8682 | pathogenic | -1.279 | Destabilizing | 0.981 | D | 0.662 | neutral | None | None | None | None | N |
V/R | 0.877 | likely_pathogenic | 0.8348 | pathogenic | -0.81 | Destabilizing | 0.945 | D | 0.694 | prob.neutral | None | None | None | None | N |
V/S | 0.7487 | likely_pathogenic | 0.7001 | pathogenic | -1.705 | Destabilizing | 0.945 | D | 0.624 | neutral | None | None | None | None | N |
V/T | 0.6316 | likely_pathogenic | 0.59 | pathogenic | -1.567 | Destabilizing | 0.707 | D | 0.607 | neutral | None | None | None | None | N |
V/W | 0.9734 | likely_pathogenic | 0.9669 | pathogenic | -1.455 | Destabilizing | 0.995 | D | 0.663 | neutral | None | None | None | None | N |
V/Y | 0.9178 | likely_pathogenic | 0.8999 | pathogenic | -1.163 | Destabilizing | 0.945 | D | 0.62 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.