Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7138 | 21637;21638;21639 | chr2:178723688;178723687;178723686 | chr2:179588415;179588414;179588413 |
N2AB | 6821 | 20686;20687;20688 | chr2:178723688;178723687;178723686 | chr2:179588415;179588414;179588413 |
N2A | 5894 | 17905;17906;17907 | chr2:178723688;178723687;178723686 | chr2:179588415;179588414;179588413 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs2078830864 | None | 0.953 | N | 0.337 | 0.213 | 0.376039117802 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/A | rs2078830864 | None | 0.953 | N | 0.337 | 0.213 | 0.376039117802 | gnomAD-4.0.0 | 6.57289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47042E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0905 | likely_benign | 0.0892 | benign | -0.369 | Destabilizing | 0.953 | D | 0.337 | neutral | N | 0.492694222 | None | None | N |
S/C | 0.1474 | likely_benign | 0.1466 | benign | -0.31 | Destabilizing | 0.265 | N | 0.332 | neutral | N | 0.517852823 | None | None | N |
S/D | 0.536 | ambiguous | 0.5075 | ambiguous | 0.594 | Stabilizing | 0.993 | D | 0.481 | neutral | None | None | None | None | N |
S/E | 0.5764 | likely_pathogenic | 0.5328 | ambiguous | 0.618 | Stabilizing | 0.999 | D | 0.486 | neutral | None | None | None | None | N |
S/F | 0.1642 | likely_benign | 0.1479 | benign | -0.681 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | N | 0.502457593 | None | None | N |
S/G | 0.1541 | likely_benign | 0.1585 | benign | -0.601 | Destabilizing | 0.171 | N | 0.179 | neutral | None | None | None | None | N |
S/H | 0.3867 | ambiguous | 0.3477 | ambiguous | -0.89 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | N |
S/I | 0.1753 | likely_benign | 0.1609 | benign | 0.138 | Stabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
S/K | 0.7171 | likely_pathogenic | 0.6749 | pathogenic | -0.035 | Destabilizing | 0.993 | D | 0.485 | neutral | None | None | None | None | N |
S/L | 0.1026 | likely_benign | 0.1018 | benign | 0.138 | Stabilizing | 0.985 | D | 0.586 | neutral | None | None | None | None | N |
S/M | 0.2649 | likely_benign | 0.2515 | benign | -0.057 | Destabilizing | 1.0 | D | 0.584 | neutral | None | None | None | None | N |
S/N | 0.2613 | likely_benign | 0.2467 | benign | -0.144 | Destabilizing | 0.993 | D | 0.501 | neutral | None | None | None | None | N |
S/P | 0.8973 | likely_pathogenic | 0.8946 | pathogenic | 0.003 | Stabilizing | 0.999 | D | 0.598 | neutral | N | 0.5219542 | None | None | N |
S/Q | 0.5533 | ambiguous | 0.5128 | ambiguous | -0.132 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
S/R | 0.5601 | ambiguous | 0.5143 | ambiguous | -0.08 | Destabilizing | 0.999 | D | 0.598 | neutral | None | None | None | None | N |
S/T | 0.0946 | likely_benign | 0.0936 | benign | -0.165 | Destabilizing | 0.99 | D | 0.497 | neutral | D | 0.534270265 | None | None | N |
S/V | 0.1615 | likely_benign | 0.1502 | benign | 0.003 | Stabilizing | 0.996 | D | 0.61 | neutral | None | None | None | None | N |
S/W | 0.3741 | ambiguous | 0.345 | ambiguous | -0.753 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/Y | 0.1781 | likely_benign | 0.157 | benign | -0.379 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.486150537 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.