Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7145 | 21658;21659;21660 | chr2:178723667;178723666;178723665 | chr2:179588394;179588393;179588392 |
N2AB | 6828 | 20707;20708;20709 | chr2:178723667;178723666;178723665 | chr2:179588394;179588393;179588392 |
N2A | 5901 | 17926;17927;17928 | chr2:178723667;178723666;178723665 | chr2:179588394;179588393;179588392 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs745988872 | -0.68 | 0.058 | N | 0.239 | 0.046 | 0.137902524267 | gnomAD-2.1.1 | 4.3E-06 | None | None | None | None | N | None | 0 | 3.14E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs745988872 | -0.68 | 0.058 | N | 0.239 | 0.046 | 0.137902524267 | gnomAD-4.0.0 | 1.63743E-06 | None | None | None | None | N | None | 0 | 2.44475E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0644 | likely_benign | 0.0658 | benign | -0.618 | Destabilizing | 0.698 | D | 0.451 | neutral | N | 0.467964263 | None | None | N |
P/C | 0.4367 | ambiguous | 0.4603 | ambiguous | -0.686 | Destabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
P/D | 0.2681 | likely_benign | 0.2796 | benign | -0.264 | Destabilizing | 0.956 | D | 0.515 | neutral | None | None | None | None | N |
P/E | 0.2106 | likely_benign | 0.2268 | benign | -0.326 | Destabilizing | 0.956 | D | 0.507 | neutral | None | None | None | None | N |
P/F | 0.3345 | likely_benign | 0.3373 | benign | -0.563 | Destabilizing | 0.915 | D | 0.662 | neutral | None | None | None | None | N |
P/G | 0.2432 | likely_benign | 0.2535 | benign | -0.817 | Destabilizing | 0.754 | D | 0.501 | neutral | None | None | None | None | N |
P/H | 0.1593 | likely_benign | 0.1678 | benign | -0.268 | Destabilizing | 0.992 | D | 0.625 | neutral | N | 0.461870633 | None | None | N |
P/I | 0.2467 | likely_benign | 0.2563 | benign | -0.217 | Destabilizing | 0.978 | D | 0.661 | neutral | None | None | None | None | N |
P/K | 0.2575 | likely_benign | 0.2703 | benign | -0.575 | Destabilizing | 0.956 | D | 0.52 | neutral | None | None | None | None | N |
P/L | 0.1075 | likely_benign | 0.1089 | benign | -0.217 | Destabilizing | 0.942 | D | 0.591 | neutral | N | 0.463009495 | None | None | N |
P/M | 0.251 | likely_benign | 0.257 | benign | -0.401 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
P/N | 0.2231 | likely_benign | 0.2345 | benign | -0.386 | Destabilizing | 0.956 | D | 0.613 | neutral | None | None | None | None | N |
P/Q | 0.1413 | likely_benign | 0.1511 | benign | -0.553 | Destabilizing | 0.956 | D | 0.578 | neutral | None | None | None | None | N |
P/R | 0.1673 | likely_benign | 0.1773 | benign | -0.099 | Destabilizing | 0.942 | D | 0.629 | neutral | N | 0.501538119 | None | None | N |
P/S | 0.0962 | likely_benign | 0.0994 | benign | -0.812 | Destabilizing | 0.058 | N | 0.239 | neutral | N | 0.443257819 | None | None | N |
P/T | 0.0959 | likely_benign | 0.1007 | benign | -0.763 | Destabilizing | 0.698 | D | 0.485 | neutral | N | 0.451373247 | None | None | N |
P/V | 0.1754 | likely_benign | 0.1838 | benign | -0.315 | Destabilizing | 0.956 | D | 0.542 | neutral | None | None | None | None | N |
P/W | 0.5215 | ambiguous | 0.5332 | ambiguous | -0.679 | Destabilizing | 0.998 | D | 0.7 | prob.neutral | None | None | None | None | N |
P/Y | 0.3058 | likely_benign | 0.3116 | benign | -0.38 | Destabilizing | 0.16 | N | 0.401 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.