Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7150 | 21673;21674;21675 | chr2:178723652;178723651;178723650 | chr2:179588379;179588378;179588377 |
N2AB | 6833 | 20722;20723;20724 | chr2:178723652;178723651;178723650 | chr2:179588379;179588378;179588377 |
N2A | 5906 | 17941;17942;17943 | chr2:178723652;178723651;178723650 | chr2:179588379;179588378;179588377 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1248770778 | None | 0.896 | N | 0.404 | 0.265 | 0.184867976434 | gnomAD-4.0.0 | 3.21365E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88063E-06 | 0 | 3.04971E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.115 | likely_benign | 0.1145 | benign | -1.093 | Destabilizing | 0.896 | D | 0.407 | neutral | N | 0.477581037 | None | None | I |
P/C | 0.6276 | likely_pathogenic | 0.6561 | pathogenic | -0.878 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
P/D | 0.705 | likely_pathogenic | 0.726 | pathogenic | -0.805 | Destabilizing | 0.988 | D | 0.411 | neutral | None | None | None | None | I |
P/E | 0.3818 | ambiguous | 0.3858 | ambiguous | -0.825 | Destabilizing | 0.976 | D | 0.386 | neutral | None | None | None | None | I |
P/F | 0.6473 | likely_pathogenic | 0.6832 | pathogenic | -0.805 | Destabilizing | 0.976 | D | 0.621 | neutral | None | None | None | None | I |
P/G | 0.4832 | ambiguous | 0.5006 | ambiguous | -1.369 | Destabilizing | 0.988 | D | 0.471 | neutral | None | None | None | None | I |
P/H | 0.309 | likely_benign | 0.3373 | benign | -0.791 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | I |
P/I | 0.3691 | ambiguous | 0.3697 | ambiguous | -0.457 | Destabilizing | 0.952 | D | 0.55 | neutral | None | None | None | None | I |
P/K | 0.3939 | ambiguous | 0.4174 | ambiguous | -1.047 | Destabilizing | 0.261 | N | 0.291 | neutral | None | None | None | None | I |
P/L | 0.1417 | likely_benign | 0.1571 | benign | -0.457 | Destabilizing | 0.026 | N | 0.371 | neutral | N | 0.493531924 | None | None | I |
P/M | 0.4177 | ambiguous | 0.4385 | ambiguous | -0.474 | Destabilizing | 0.976 | D | 0.552 | neutral | None | None | None | None | I |
P/N | 0.5589 | ambiguous | 0.5768 | pathogenic | -0.86 | Destabilizing | 0.988 | D | 0.545 | neutral | None | None | None | None | I |
P/Q | 0.2305 | likely_benign | 0.2427 | benign | -1.014 | Destabilizing | 0.968 | D | 0.389 | neutral | N | 0.500132609 | None | None | I |
P/R | 0.2296 | likely_benign | 0.2438 | benign | -0.511 | Destabilizing | 0.938 | D | 0.533 | neutral | N | 0.502556839 | None | None | I |
P/S | 0.2095 | likely_benign | 0.2165 | benign | -1.344 | Destabilizing | 0.896 | D | 0.404 | neutral | N | 0.479122619 | None | None | I |
P/T | 0.1448 | likely_benign | 0.1451 | benign | -1.251 | Destabilizing | 0.984 | D | 0.399 | neutral | N | 0.456861835 | None | None | I |
P/V | 0.2603 | likely_benign | 0.2569 | benign | -0.633 | Destabilizing | 0.851 | D | 0.481 | neutral | None | None | None | None | I |
P/W | 0.727 | likely_pathogenic | 0.7646 | pathogenic | -0.956 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
P/Y | 0.5895 | likely_pathogenic | 0.6346 | pathogenic | -0.674 | Destabilizing | 0.988 | D | 0.625 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.