Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7153 | 21682;21683;21684 | chr2:178723643;178723642;178723641 | chr2:179588370;179588369;179588368 |
N2AB | 6836 | 20731;20732;20733 | chr2:178723643;178723642;178723641 | chr2:179588370;179588369;179588368 |
N2A | 5909 | 17950;17951;17952 | chr2:178723643;178723642;178723641 | chr2:179588370;179588369;179588368 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1287422733 | -0.785 | 0.023 | N | 0.113 | 0.061 | 0.0846915920261 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 2.95E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/S | rs1287422733 | -0.785 | 0.023 | N | 0.113 | 0.061 | 0.0846915920261 | gnomAD-4.0.0 | 1.60046E-06 | None | None | None | None | N | None | 0 | 2.3083E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2393 | likely_benign | 0.2334 | benign | -0.812 | Destabilizing | 0.329 | N | 0.325 | neutral | None | None | None | None | N |
N/C | 0.4483 | ambiguous | 0.4637 | ambiguous | 0.104 | Stabilizing | 0.995 | D | 0.308 | neutral | None | None | None | None | N |
N/D | 0.1244 | likely_benign | 0.1274 | benign | 0.01 | Stabilizing | 0.006 | N | 0.123 | neutral | N | 0.460208784 | None | None | N |
N/E | 0.3802 | ambiguous | 0.3692 | ambiguous | 0.084 | Stabilizing | 0.329 | N | 0.248 | neutral | None | None | None | None | N |
N/F | 0.6301 | likely_pathogenic | 0.6279 | pathogenic | -0.685 | Destabilizing | 0.807 | D | 0.387 | neutral | None | None | None | None | N |
N/G | 0.3326 | likely_benign | 0.3254 | benign | -1.124 | Destabilizing | 0.329 | N | 0.231 | neutral | None | None | None | None | N |
N/H | 0.1544 | likely_benign | 0.157 | benign | -0.854 | Destabilizing | 0.863 | D | 0.33 | neutral | N | 0.463529701 | None | None | N |
N/I | 0.2934 | likely_benign | 0.2895 | benign | -0.033 | Destabilizing | 0.863 | D | 0.385 | neutral | N | 0.490027746 | None | None | N |
N/K | 0.3158 | likely_benign | 0.2998 | benign | -0.097 | Destabilizing | 0.01 | N | 0.107 | neutral | N | 0.494014714 | None | None | N |
N/L | 0.331 | likely_benign | 0.3176 | benign | -0.033 | Destabilizing | 0.543 | D | 0.35 | neutral | None | None | None | None | N |
N/M | 0.3438 | ambiguous | 0.33 | benign | 0.32 | Stabilizing | 0.981 | D | 0.294 | neutral | None | None | None | None | N |
N/P | 0.4324 | ambiguous | 0.4238 | ambiguous | -0.263 | Destabilizing | 0.828 | D | 0.359 | neutral | None | None | None | None | N |
N/Q | 0.388 | ambiguous | 0.3773 | ambiguous | -0.586 | Destabilizing | 0.704 | D | 0.262 | neutral | None | None | None | None | N |
N/R | 0.3626 | ambiguous | 0.3482 | ambiguous | -0.132 | Destabilizing | 0.543 | D | 0.173 | neutral | None | None | None | None | N |
N/S | 0.1039 | likely_benign | 0.1032 | benign | -0.671 | Destabilizing | 0.023 | N | 0.113 | neutral | N | 0.437793284 | None | None | N |
N/T | 0.1251 | likely_benign | 0.1243 | benign | -0.401 | Destabilizing | 0.023 | N | 0.123 | neutral | N | 0.430963313 | None | None | N |
N/V | 0.3042 | likely_benign | 0.294 | benign | -0.263 | Destabilizing | 0.704 | D | 0.361 | neutral | None | None | None | None | N |
N/W | 0.7899 | likely_pathogenic | 0.7825 | pathogenic | -0.468 | Destabilizing | 0.985 | D | 0.316 | neutral | None | None | None | None | N |
N/Y | 0.189 | likely_benign | 0.1843 | benign | -0.266 | Destabilizing | 0.002 | N | 0.254 | neutral | N | 0.501637541 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.