Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7154 | 21685;21686;21687 | chr2:178723640;178723639;178723638 | chr2:179588367;179588366;179588365 |
N2AB | 6837 | 20734;20735;20736 | chr2:178723640;178723639;178723638 | chr2:179588367;179588366;179588365 |
N2A | 5910 | 17953;17954;17955 | chr2:178723640;178723639;178723638 | chr2:179588367;179588366;179588365 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.001 | N | 0.214 | 0.06 | 0.270889551736 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2543 | likely_benign | 0.2681 | benign | -1.697 | Destabilizing | 0.001 | N | 0.335 | neutral | N | 0.515142134 | None | None | N |
V/C | 0.7817 | likely_pathogenic | 0.7749 | pathogenic | -1.488 | Destabilizing | 0.909 | D | 0.74 | deleterious | None | None | None | None | N |
V/D | 0.7748 | likely_pathogenic | 0.801 | pathogenic | -1.446 | Destabilizing | 0.726 | D | 0.84 | deleterious | None | None | None | None | N |
V/E | 0.6557 | likely_pathogenic | 0.6906 | pathogenic | -1.29 | Destabilizing | 0.497 | N | 0.821 | deleterious | D | 0.534054752 | None | None | N |
V/F | 0.2962 | likely_benign | 0.2877 | benign | -0.998 | Destabilizing | 0.567 | D | 0.823 | deleterious | None | None | None | None | N |
V/G | 0.4598 | ambiguous | 0.4856 | ambiguous | -2.148 | Highly Destabilizing | 0.331 | N | 0.818 | deleterious | N | 0.504594191 | None | None | N |
V/H | 0.8482 | likely_pathogenic | 0.8555 | pathogenic | -1.482 | Destabilizing | 0.968 | D | 0.808 | deleterious | None | None | None | None | N |
V/I | 0.0813 | likely_benign | 0.0788 | benign | -0.488 | Destabilizing | 0.001 | N | 0.214 | neutral | N | 0.507101441 | None | None | N |
V/K | 0.6944 | likely_pathogenic | 0.7226 | pathogenic | -1.443 | Destabilizing | 0.567 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.2442 | likely_benign | 0.2379 | benign | -0.488 | Destabilizing | 0.02 | N | 0.499 | neutral | N | 0.459846397 | None | None | N |
V/M | 0.1842 | likely_benign | 0.1872 | benign | -0.658 | Destabilizing | 0.567 | D | 0.66 | neutral | None | None | None | None | N |
V/N | 0.6498 | likely_pathogenic | 0.6708 | pathogenic | -1.645 | Destabilizing | 0.726 | D | 0.841 | deleterious | None | None | None | None | N |
V/P | 0.952 | likely_pathogenic | 0.9544 | pathogenic | -0.86 | Destabilizing | 0.726 | D | 0.81 | deleterious | None | None | None | None | N |
V/Q | 0.6626 | likely_pathogenic | 0.6949 | pathogenic | -1.539 | Destabilizing | 0.726 | D | 0.809 | deleterious | None | None | None | None | N |
V/R | 0.6209 | likely_pathogenic | 0.644 | pathogenic | -1.193 | Destabilizing | 0.726 | D | 0.837 | deleterious | None | None | None | None | N |
V/S | 0.4649 | ambiguous | 0.4999 | ambiguous | -2.312 | Highly Destabilizing | 0.396 | N | 0.804 | deleterious | None | None | None | None | N |
V/T | 0.3218 | likely_benign | 0.3358 | benign | -1.996 | Destabilizing | 0.272 | N | 0.646 | neutral | None | None | None | None | N |
V/W | 0.9149 | likely_pathogenic | 0.9185 | pathogenic | -1.236 | Destabilizing | 0.968 | D | 0.769 | deleterious | None | None | None | None | N |
V/Y | 0.7162 | likely_pathogenic | 0.7217 | pathogenic | -0.912 | Destabilizing | 0.726 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.