Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7155 | 21688;21689;21690 | chr2:178723637;178723636;178723635 | chr2:179588364;179588363;179588362 |
N2AB | 6838 | 20737;20738;20739 | chr2:178723637;178723636;178723635 | chr2:179588364;179588363;179588362 |
N2A | 5911 | 17956;17957;17958 | chr2:178723637;178723636;178723635 | chr2:179588364;179588363;179588362 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.139 | N | 0.391 | 0.202 | 0.104622674875 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1137 | likely_benign | 0.1076 | benign | -0.731 | Destabilizing | 0.139 | N | 0.391 | neutral | N | 0.485156356 | None | None | N |
T/C | 0.5382 | ambiguous | 0.5256 | ambiguous | -0.564 | Destabilizing | 0.995 | D | 0.495 | neutral | None | None | None | None | N |
T/D | 0.6135 | likely_pathogenic | 0.5996 | pathogenic | 0.061 | Stabilizing | 0.704 | D | 0.495 | neutral | None | None | None | None | N |
T/E | 0.5143 | ambiguous | 0.4893 | ambiguous | 0.106 | Stabilizing | 0.329 | N | 0.472 | neutral | None | None | None | None | N |
T/F | 0.3213 | likely_benign | 0.3164 | benign | -0.774 | Destabilizing | 0.944 | D | 0.524 | neutral | None | None | None | None | N |
T/G | 0.4265 | ambiguous | 0.4135 | ambiguous | -1.016 | Destabilizing | 0.329 | N | 0.488 | neutral | None | None | None | None | N |
T/H | 0.3295 | likely_benign | 0.312 | benign | -1.167 | Destabilizing | 0.017 | N | 0.462 | neutral | None | None | None | None | N |
T/I | 0.1672 | likely_benign | 0.1753 | benign | -0.057 | Destabilizing | 0.927 | D | 0.566 | neutral | N | 0.462163802 | None | None | N |
T/K | 0.2525 | likely_benign | 0.2353 | benign | -0.527 | Destabilizing | 0.329 | N | 0.469 | neutral | None | None | None | None | N |
T/L | 0.133 | likely_benign | 0.136 | benign | -0.057 | Destabilizing | 0.704 | D | 0.501 | neutral | None | None | None | None | N |
T/M | 0.1119 | likely_benign | 0.1115 | benign | -0.065 | Destabilizing | 0.981 | D | 0.514 | neutral | None | None | None | None | N |
T/N | 0.2087 | likely_benign | 0.2027 | benign | -0.638 | Destabilizing | 0.642 | D | 0.464 | neutral | N | 0.459974983 | None | None | N |
T/P | 0.4043 | ambiguous | 0.3993 | ambiguous | -0.248 | Destabilizing | 0.006 | N | 0.352 | neutral | N | 0.520403814 | None | None | N |
T/Q | 0.3222 | likely_benign | 0.3025 | benign | -0.649 | Destabilizing | 0.085 | N | 0.395 | neutral | None | None | None | None | N |
T/R | 0.183 | likely_benign | 0.1683 | benign | -0.408 | Destabilizing | 0.003 | N | 0.319 | neutral | None | None | None | None | N |
T/S | 0.162 | likely_benign | 0.158 | benign | -0.949 | Destabilizing | 0.01 | N | 0.329 | neutral | N | 0.490785194 | None | None | N |
T/V | 0.16 | likely_benign | 0.1622 | benign | -0.248 | Destabilizing | 0.704 | D | 0.461 | neutral | None | None | None | None | N |
T/W | 0.7025 | likely_pathogenic | 0.6923 | pathogenic | -0.765 | Destabilizing | 0.995 | D | 0.546 | neutral | None | None | None | None | N |
T/Y | 0.3765 | ambiguous | 0.3629 | ambiguous | -0.482 | Destabilizing | 0.893 | D | 0.539 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.