Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7156 | 21691;21692;21693 | chr2:178723634;178723633;178723632 | chr2:179588361;179588360;179588359 |
N2AB | 6839 | 20740;20741;20742 | chr2:178723634;178723633;178723632 | chr2:179588361;179588360;179588359 |
N2A | 5912 | 17959;17960;17961 | chr2:178723634;178723633;178723632 | chr2:179588361;179588360;179588359 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/Y | None | None | 0.026 | D | 0.307 | 0.613 | 0.644949520829 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9655 | likely_pathogenic | 0.9658 | pathogenic | -2.45 | Highly Destabilizing | 0.919 | D | 0.781 | deleterious | None | None | None | None | N |
F/C | 0.8546 | likely_pathogenic | 0.8545 | pathogenic | -1.615 | Destabilizing | 0.999 | D | 0.856 | deleterious | D | 0.627040578 | None | None | N |
F/D | 0.9979 | likely_pathogenic | 0.9981 | pathogenic | -3.382 | Highly Destabilizing | 0.996 | D | 0.882 | deleterious | None | None | None | None | N |
F/E | 0.9971 | likely_pathogenic | 0.9972 | pathogenic | -3.12 | Highly Destabilizing | 0.988 | D | 0.884 | deleterious | None | None | None | None | N |
F/G | 0.9899 | likely_pathogenic | 0.9904 | pathogenic | -2.935 | Highly Destabilizing | 0.988 | D | 0.849 | deleterious | None | None | None | None | N |
F/H | 0.9799 | likely_pathogenic | 0.9822 | pathogenic | -2.203 | Highly Destabilizing | 0.976 | D | 0.764 | deleterious | None | None | None | None | N |
F/I | 0.5495 | ambiguous | 0.5255 | ambiguous | -0.844 | Destabilizing | 0.811 | D | 0.671 | neutral | N | 0.50292639 | None | None | N |
F/K | 0.9966 | likely_pathogenic | 0.9969 | pathogenic | -2.173 | Highly Destabilizing | 0.988 | D | 0.883 | deleterious | None | None | None | None | N |
F/L | 0.8642 | likely_pathogenic | 0.8481 | pathogenic | -0.844 | Destabilizing | 0.026 | N | 0.323 | neutral | N | 0.479646347 | None | None | N |
F/M | 0.7503 | likely_pathogenic | 0.7257 | pathogenic | -0.738 | Destabilizing | 0.976 | D | 0.687 | prob.neutral | None | None | None | None | N |
F/N | 0.9907 | likely_pathogenic | 0.9917 | pathogenic | -2.907 | Highly Destabilizing | 0.988 | D | 0.874 | deleterious | None | None | None | None | N |
F/P | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -1.396 | Destabilizing | 0.996 | D | 0.885 | deleterious | None | None | None | None | N |
F/Q | 0.9939 | likely_pathogenic | 0.9942 | pathogenic | -2.617 | Highly Destabilizing | 0.988 | D | 0.88 | deleterious | None | None | None | None | N |
F/R | 0.9905 | likely_pathogenic | 0.9915 | pathogenic | -2.196 | Highly Destabilizing | 0.988 | D | 0.883 | deleterious | None | None | None | None | N |
F/S | 0.9735 | likely_pathogenic | 0.9761 | pathogenic | -3.341 | Highly Destabilizing | 0.984 | D | 0.836 | deleterious | D | 0.627040578 | None | None | N |
F/T | 0.9826 | likely_pathogenic | 0.9824 | pathogenic | -2.941 | Highly Destabilizing | 0.988 | D | 0.837 | deleterious | None | None | None | None | N |
F/V | 0.5974 | likely_pathogenic | 0.5786 | pathogenic | -1.396 | Destabilizing | 0.811 | D | 0.701 | prob.neutral | D | 0.526488374 | None | None | N |
F/W | 0.8784 | likely_pathogenic | 0.8803 | pathogenic | -0.3 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | None | None | None | None | N |
F/Y | 0.5297 | ambiguous | 0.5607 | ambiguous | -0.737 | Destabilizing | 0.026 | N | 0.307 | neutral | D | 0.594800052 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.