Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7160 | 21703;21704;21705 | chr2:178723622;178723621;178723620 | chr2:179588349;179588348;179588347 |
N2AB | 6843 | 20752;20753;20754 | chr2:178723622;178723621;178723620 | chr2:179588349;179588348;179588347 |
N2A | 5916 | 17971;17972;17973 | chr2:178723622;178723621;178723620 | chr2:179588349;179588348;179588347 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.642 | D | 0.675 | 0.435 | 0.734902578319 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8131 | likely_pathogenic | 0.8222 | pathogenic | -2.013 | Highly Destabilizing | 0.329 | N | 0.586 | neutral | None | None | None | None | N |
I/C | 0.9118 | likely_pathogenic | 0.9151 | pathogenic | -1.247 | Destabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | N |
I/D | 0.9947 | likely_pathogenic | 0.9945 | pathogenic | -1.806 | Destabilizing | 0.981 | D | 0.821 | deleterious | None | None | None | None | N |
I/E | 0.9824 | likely_pathogenic | 0.982 | pathogenic | -1.507 | Destabilizing | 0.944 | D | 0.809 | deleterious | None | None | None | None | N |
I/F | 0.2922 | likely_benign | 0.2797 | benign | -1.042 | Destabilizing | 0.006 | N | 0.376 | neutral | D | 0.530792817 | None | None | N |
I/G | 0.9647 | likely_pathogenic | 0.9676 | pathogenic | -2.619 | Highly Destabilizing | 0.828 | D | 0.789 | deleterious | None | None | None | None | N |
I/H | 0.9667 | likely_pathogenic | 0.9654 | pathogenic | -2.227 | Highly Destabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | N |
I/K | 0.9596 | likely_pathogenic | 0.9588 | pathogenic | -1.226 | Destabilizing | 0.944 | D | 0.801 | deleterious | None | None | None | None | N |
I/L | 0.1481 | likely_benign | 0.1626 | benign | -0.24 | Destabilizing | 0.002 | N | 0.218 | neutral | N | 0.490868992 | None | None | N |
I/M | 0.1875 | likely_benign | 0.1989 | benign | -0.364 | Destabilizing | 0.139 | N | 0.391 | neutral | N | 0.512376002 | None | None | N |
I/N | 0.9372 | likely_pathogenic | 0.9363 | pathogenic | -1.725 | Destabilizing | 0.975 | D | 0.823 | deleterious | D | 0.530987236 | None | None | N |
I/P | 0.9751 | likely_pathogenic | 0.9747 | pathogenic | -0.814 | Destabilizing | 0.981 | D | 0.821 | deleterious | None | None | None | None | N |
I/Q | 0.956 | likely_pathogenic | 0.9554 | pathogenic | -1.381 | Destabilizing | 0.944 | D | 0.82 | deleterious | None | None | None | None | N |
I/R | 0.9387 | likely_pathogenic | 0.9372 | pathogenic | -1.394 | Destabilizing | 0.944 | D | 0.822 | deleterious | None | None | None | None | N |
I/S | 0.8837 | likely_pathogenic | 0.8869 | pathogenic | -2.487 | Highly Destabilizing | 0.784 | D | 0.747 | deleterious | N | 0.512284414 | None | None | N |
I/T | 0.8005 | likely_pathogenic | 0.7999 | pathogenic | -2.012 | Highly Destabilizing | 0.642 | D | 0.675 | prob.neutral | D | 0.527136436 | None | None | N |
I/V | 0.1129 | likely_benign | 0.1158 | benign | -0.814 | Destabilizing | 0.001 | N | 0.183 | neutral | N | 0.407124527 | None | None | N |
I/W | 0.9535 | likely_pathogenic | 0.9529 | pathogenic | -1.379 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
I/Y | 0.8732 | likely_pathogenic | 0.8705 | pathogenic | -1.052 | Destabilizing | 0.807 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.