Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7161 | 21706;21707;21708 | chr2:178723619;178723618;178723617 | chr2:179588346;179588345;179588344 |
N2AB | 6844 | 20755;20756;20757 | chr2:178723619;178723618;178723617 | chr2:179588346;179588345;179588344 |
N2A | 5917 | 17974;17975;17976 | chr2:178723619;178723618;178723617 | chr2:179588346;179588345;179588344 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1225806135 | -0.034 | 0.002 | N | 0.087 | 0.159 | 0.15556083564 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs1225806135 | -0.034 | 0.002 | N | 0.087 | 0.159 | 0.15556083564 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/K | rs1225806135 | -0.034 | 0.002 | N | 0.087 | 0.159 | 0.15556083564 | gnomAD-4.0.0 | 3.84877E-06 | None | None | None | None | N | None | 1.69302E-05 | 1.69877E-05 | None | 0 | 0 | None | 0 | 0 | 2.39526E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2034 | likely_benign | 0.1861 | benign | -0.116 | Destabilizing | 0.176 | N | 0.191 | neutral | None | None | None | None | N |
R/C | 0.168 | likely_benign | 0.1735 | benign | -0.371 | Destabilizing | 0.017 | N | 0.229 | neutral | None | None | None | None | N |
R/D | 0.5282 | ambiguous | 0.493 | ambiguous | -0.07 | Destabilizing | 0.704 | D | 0.303 | neutral | None | None | None | None | N |
R/E | 0.2069 | likely_benign | 0.1935 | benign | -0.021 | Destabilizing | 0.329 | N | 0.213 | neutral | None | None | None | None | N |
R/F | 0.436 | ambiguous | 0.422 | ambiguous | -0.433 | Destabilizing | 0.981 | D | 0.233 | neutral | None | None | None | None | N |
R/G | 0.1417 | likely_benign | 0.1326 | benign | -0.274 | Destabilizing | 0.425 | N | 0.24 | neutral | N | 0.512433556 | None | None | N |
R/H | 0.0984 | likely_benign | 0.0979 | benign | -0.668 | Destabilizing | 0.944 | D | 0.325 | neutral | None | None | None | None | N |
R/I | 0.2021 | likely_benign | 0.1967 | benign | 0.257 | Stabilizing | 0.642 | D | 0.307 | neutral | N | 0.513356276 | None | None | N |
R/K | 0.0732 | likely_benign | 0.0707 | benign | -0.19 | Destabilizing | 0.002 | N | 0.087 | neutral | N | 0.42908424 | None | None | N |
R/L | 0.1826 | likely_benign | 0.1702 | benign | 0.257 | Stabilizing | 0.495 | N | 0.235 | neutral | None | None | None | None | N |
R/M | 0.1656 | likely_benign | 0.1657 | benign | -0.109 | Destabilizing | 0.981 | D | 0.256 | neutral | None | None | None | None | N |
R/N | 0.3945 | ambiguous | 0.3635 | ambiguous | -0.044 | Destabilizing | 0.704 | D | 0.192 | neutral | None | None | None | None | N |
R/P | 0.8488 | likely_pathogenic | 0.8264 | pathogenic | 0.152 | Stabilizing | 0.828 | D | 0.309 | neutral | None | None | None | None | N |
R/Q | 0.084 | likely_benign | 0.0817 | benign | -0.144 | Destabilizing | 0.085 | N | 0.14 | neutral | None | None | None | None | N |
R/S | 0.2449 | likely_benign | 0.2257 | benign | -0.411 | Destabilizing | 0.065 | N | 0.155 | neutral | N | 0.444013621 | None | None | N |
R/T | 0.1121 | likely_benign | 0.1089 | benign | -0.24 | Destabilizing | 0.023 | N | 0.157 | neutral | N | 0.450286232 | None | None | N |
R/V | 0.2586 | likely_benign | 0.2434 | benign | 0.152 | Stabilizing | 0.704 | D | 0.284 | neutral | None | None | None | None | N |
R/W | 0.1412 | likely_benign | 0.1494 | benign | -0.513 | Destabilizing | 0.995 | D | 0.206 | neutral | None | None | None | None | N |
R/Y | 0.3177 | likely_benign | 0.3083 | benign | -0.099 | Destabilizing | 0.981 | D | 0.241 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.