Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7162 | 21709;21710;21711 | chr2:178723616;178723615;178723614 | chr2:179588343;179588342;179588341 |
N2AB | 6845 | 20758;20759;20760 | chr2:178723616;178723615;178723614 | chr2:179588343;179588342;179588341 |
N2A | 5918 | 17977;17978;17979 | chr2:178723616;178723615;178723614 | chr2:179588343;179588342;179588341 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1288993592 | -0.487 | 1.0 | D | 0.805 | 0.642 | 0.883724802589 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
G/R | rs1288993592 | -0.487 | 1.0 | D | 0.805 | 0.642 | 0.883724802589 | gnomAD-4.0.0 | 1.59343E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86084E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7381 | likely_pathogenic | 0.6869 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.567876081 | None | None | I |
G/C | 0.9546 | likely_pathogenic | 0.9446 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
G/D | 0.9796 | likely_pathogenic | 0.9756 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/E | 0.9843 | likely_pathogenic | 0.9827 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.609504993 | None | None | I |
G/F | 0.994 | likely_pathogenic | 0.9925 | pathogenic | -0.813 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
G/H | 0.9966 | likely_pathogenic | 0.9957 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
G/I | 0.9836 | likely_pathogenic | 0.9802 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
G/K | 0.9958 | likely_pathogenic | 0.9953 | pathogenic | -0.934 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/L | 0.9889 | likely_pathogenic | 0.9867 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
G/M | 0.9919 | likely_pathogenic | 0.9905 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
G/N | 0.988 | likely_pathogenic | 0.9861 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
G/P | 0.9976 | likely_pathogenic | 0.9971 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/Q | 0.9933 | likely_pathogenic | 0.9923 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/R | 0.9895 | likely_pathogenic | 0.988 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.638443416 | None | None | I |
G/S | 0.7992 | likely_pathogenic | 0.7577 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/T | 0.9615 | likely_pathogenic | 0.954 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
G/V | 0.9598 | likely_pathogenic | 0.9521 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.62915683 | None | None | I |
G/W | 0.9872 | likely_pathogenic | 0.985 | pathogenic | -1.076 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
G/Y | 0.9918 | likely_pathogenic | 0.9901 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.