Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7165 | 21718;21719;21720 | chr2:178723607;178723606;178723605 | chr2:179588334;179588333;179588332 |
N2AB | 6848 | 20767;20768;20769 | chr2:178723607;178723606;178723605 | chr2:179588334;179588333;179588332 |
N2A | 5921 | 17986;17987;17988 | chr2:178723607;178723606;178723605 | chr2:179588334;179588333;179588332 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1370391729 | 0.107 | 1.0 | N | 0.69 | 0.436 | 0.811862050649 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs1370391729 | 0.107 | 1.0 | N | 0.69 | 0.436 | 0.811862050649 | gnomAD-4.0.0 | 1.59299E-06 | None | None | None | None | I | None | 0 | 2.29022E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1983 | likely_benign | 0.223 | benign | -0.51 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.488642071 | None | None | I |
P/C | 0.7705 | likely_pathogenic | 0.8172 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
P/D | 0.6053 | likely_pathogenic | 0.6294 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
P/E | 0.4749 | ambiguous | 0.5141 | ambiguous | -0.51 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
P/F | 0.7409 | likely_pathogenic | 0.7795 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | I |
P/G | 0.5603 | ambiguous | 0.5819 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
P/H | 0.4285 | ambiguous | 0.4728 | ambiguous | -0.215 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
P/I | 0.5561 | ambiguous | 0.612 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
P/K | 0.5975 | likely_pathogenic | 0.6301 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
P/L | 0.2793 | likely_benign | 0.3252 | benign | -0.264 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | N | 0.500683166 | None | None | I |
P/M | 0.5845 | likely_pathogenic | 0.6406 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
P/N | 0.543 | ambiguous | 0.5779 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
P/Q | 0.3691 | ambiguous | 0.4184 | ambiguous | -0.392 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.488931559 | None | None | I |
P/R | 0.3877 | ambiguous | 0.421 | ambiguous | 0.02 | Stabilizing | 1.0 | D | 0.673 | neutral | N | 0.495745642 | None | None | I |
P/S | 0.2727 | likely_benign | 0.3079 | benign | -0.507 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.501568539 | None | None | I |
P/T | 0.2372 | likely_benign | 0.2708 | benign | -0.501 | Destabilizing | 1.0 | D | 0.675 | neutral | D | 0.533864834 | None | None | I |
P/V | 0.4045 | ambiguous | 0.4509 | ambiguous | -0.312 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/W | 0.8667 | likely_pathogenic | 0.8881 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
P/Y | 0.6999 | likely_pathogenic | 0.7326 | pathogenic | -0.493 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.