Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7171 | 21736;21737;21738 | chr2:178723589;178723588;178723587 | chr2:179588316;179588315;179588314 |
N2AB | 6854 | 20785;20786;20787 | chr2:178723589;178723588;178723587 | chr2:179588316;179588315;179588314 |
N2A | 5927 | 18004;18005;18006 | chr2:178723589;178723588;178723587 | chr2:179588316;179588315;179588314 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.589 | 0.366 | 0.380730819819 | gnomAD-4.0.0 | 1.36884E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79924E-06 | 0 | 0 |
F/V | rs750008949 | -2.172 | 1.0 | N | 0.781 | 0.468 | 0.721980647632 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
F/V | rs750008949 | -2.172 | 1.0 | N | 0.781 | 0.468 | 0.721980647632 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/V | rs750008949 | -2.172 | 1.0 | N | 0.781 | 0.468 | 0.721980647632 | gnomAD-4.0.0 | 2.04564E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.79759E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8692 | likely_pathogenic | 0.8861 | pathogenic | -2.553 | Highly Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
F/C | 0.6526 | likely_pathogenic | 0.6873 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.518744746 | None | None | N |
F/D | 0.9491 | likely_pathogenic | 0.9583 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
F/E | 0.9261 | likely_pathogenic | 0.9354 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
F/G | 0.9119 | likely_pathogenic | 0.9265 | pathogenic | -2.904 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
F/H | 0.624 | likely_pathogenic | 0.6498 | pathogenic | -1.171 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
F/I | 0.5123 | ambiguous | 0.524 | ambiguous | -1.464 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.477634711 | None | None | N |
F/K | 0.8514 | likely_pathogenic | 0.8636 | pathogenic | -1.327 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
F/L | 0.9096 | likely_pathogenic | 0.9135 | pathogenic | -1.464 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.505058427 | None | None | N |
F/M | 0.74 | likely_pathogenic | 0.7538 | pathogenic | -1.097 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
F/N | 0.8052 | likely_pathogenic | 0.8283 | pathogenic | -1.4 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
F/P | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -1.826 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
F/Q | 0.7952 | likely_pathogenic | 0.82 | pathogenic | -1.542 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
F/R | 0.737 | likely_pathogenic | 0.7589 | pathogenic | -0.614 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
F/S | 0.6756 | likely_pathogenic | 0.7152 | pathogenic | -2.171 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.455340174 | None | None | N |
F/T | 0.8449 | likely_pathogenic | 0.8565 | pathogenic | -1.977 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
F/V | 0.5312 | ambiguous | 0.5488 | ambiguous | -1.826 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.474836781 | None | None | N |
F/W | 0.578 | likely_pathogenic | 0.5795 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
F/Y | 0.1772 | likely_benign | 0.1791 | benign | -0.736 | Destabilizing | 0.999 | D | 0.511 | neutral | N | 0.488550179 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.