Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7176 | 21751;21752;21753 | chr2:178723574;178723573;178723572 | chr2:179588301;179588300;179588299 |
N2AB | 6859 | 20800;20801;20802 | chr2:178723574;178723573;178723572 | chr2:179588301;179588300;179588299 |
N2A | 5932 | 18019;18020;18021 | chr2:178723574;178723573;178723572 | chr2:179588301;179588300;179588299 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2078807925 | None | 1.0 | N | 0.676 | 0.589 | 0.565318601174 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2001 | likely_benign | 0.2065 | benign | -0.63 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | N | 0.504254792 | None | None | N |
E/C | 0.9024 | likely_pathogenic | 0.9032 | pathogenic | -0.428 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/D | 0.3544 | ambiguous | 0.3709 | ambiguous | -0.687 | Destabilizing | 0.999 | D | 0.497 | neutral | N | 0.483895584 | None | None | N |
E/F | 0.8503 | likely_pathogenic | 0.8551 | pathogenic | 0.053 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/G | 0.2686 | likely_benign | 0.2876 | benign | -0.949 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | N | 0.510637574 | None | None | N |
E/H | 0.6398 | likely_pathogenic | 0.6451 | pathogenic | 0.175 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
E/I | 0.4336 | ambiguous | 0.4456 | ambiguous | 0.225 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/K | 0.1755 | likely_benign | 0.1807 | benign | -0.148 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.487098362 | None | None | N |
E/L | 0.4439 | ambiguous | 0.4537 | ambiguous | 0.225 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/M | 0.5044 | ambiguous | 0.512 | ambiguous | 0.337 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/N | 0.4687 | ambiguous | 0.4827 | ambiguous | -0.786 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/P | 0.419 | ambiguous | 0.4287 | ambiguous | -0.039 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/Q | 0.1576 | likely_benign | 0.1572 | benign | -0.66 | Destabilizing | 1.0 | D | 0.629 | neutral | N | 0.486719968 | None | None | N |
E/R | 0.3319 | likely_benign | 0.3375 | benign | 0.267 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/S | 0.3617 | ambiguous | 0.3768 | ambiguous | -0.998 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/T | 0.3882 | ambiguous | 0.3967 | ambiguous | -0.725 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/V | 0.248 | likely_benign | 0.2537 | benign | -0.039 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.485847822 | None | None | N |
E/W | 0.9483 | likely_pathogenic | 0.9499 | pathogenic | 0.366 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/Y | 0.7694 | likely_pathogenic | 0.7755 | pathogenic | 0.33 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.