Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7185 | 21778;21779;21780 | chr2:178723547;178723546;178723545 | chr2:179588274;179588273;179588272 |
N2AB | 6868 | 20827;20828;20829 | chr2:178723547;178723546;178723545 | chr2:179588274;179588273;179588272 |
N2A | 5941 | 18046;18047;18048 | chr2:178723547;178723546;178723545 | chr2:179588274;179588273;179588272 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs552242411 | -1.512 | 0.934 | N | 0.555 | 0.46 | 0.627026710118 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/F | rs552242411 | -1.512 | 0.934 | N | 0.555 | 0.46 | 0.627026710118 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/F | rs552242411 | -1.512 | 0.934 | N | 0.555 | 0.46 | 0.627026710118 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
I/F | rs552242411 | -1.512 | 0.934 | N | 0.555 | 0.46 | 0.627026710118 | gnomAD-4.0.0 | 1.82672E-05 | None | None | None | None | N | None | 1.74319E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.04842E-05 | 0 | 0 |
I/L | None | None | 0.267 | N | 0.269 | 0.221 | 0.495238560318 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/L | None | None | 0.267 | N | 0.269 | 0.221 | 0.495238560318 | gnomAD-4.0.0 | 6.57281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.93125E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs771134456 | -2.431 | 0.801 | D | 0.458 | 0.395 | 0.720981639776 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs771134456 | -2.431 | 0.801 | D | 0.458 | 0.395 | 0.720981639776 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs771134456 | -2.431 | 0.801 | D | 0.458 | 0.395 | 0.720981639776 | gnomAD-4.0.0 | 5.12686E-06 | None | None | None | None | N | None | 6.76819E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5036 | ambiguous | 0.4793 | ambiguous | -2.214 | Highly Destabilizing | 0.029 | N | 0.233 | neutral | None | None | None | None | N |
I/C | 0.7526 | likely_pathogenic | 0.7545 | pathogenic | -1.098 | Destabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | N |
I/D | 0.8226 | likely_pathogenic | 0.8071 | pathogenic | -2.077 | Highly Destabilizing | 0.974 | D | 0.646 | neutral | None | None | None | None | N |
I/E | 0.7426 | likely_pathogenic | 0.7155 | pathogenic | -1.975 | Destabilizing | 0.974 | D | 0.629 | neutral | None | None | None | None | N |
I/F | 0.1851 | likely_benign | 0.1912 | benign | -1.442 | Destabilizing | 0.934 | D | 0.555 | neutral | N | 0.486697196 | None | None | N |
I/G | 0.7628 | likely_pathogenic | 0.748 | pathogenic | -2.643 | Highly Destabilizing | 0.728 | D | 0.561 | neutral | None | None | None | None | N |
I/H | 0.6267 | likely_pathogenic | 0.6125 | pathogenic | -2.001 | Highly Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
I/K | 0.5594 | ambiguous | 0.5444 | ambiguous | -1.579 | Destabilizing | 0.842 | D | 0.625 | neutral | None | None | None | None | N |
I/L | 0.1377 | likely_benign | 0.14 | benign | -1.032 | Destabilizing | 0.267 | N | 0.269 | neutral | N | 0.486226215 | None | None | N |
I/M | 0.1205 | likely_benign | 0.1259 | benign | -0.664 | Destabilizing | 0.267 | N | 0.277 | neutral | N | 0.498027048 | None | None | N |
I/N | 0.4174 | ambiguous | 0.3913 | ambiguous | -1.501 | Destabilizing | 0.989 | D | 0.649 | neutral | D | 0.537846863 | None | None | N |
I/P | 0.8781 | likely_pathogenic | 0.8784 | pathogenic | -1.402 | Destabilizing | 0.974 | D | 0.65 | neutral | None | None | None | None | N |
I/Q | 0.617 | likely_pathogenic | 0.6101 | pathogenic | -1.567 | Destabilizing | 0.974 | D | 0.651 | neutral | None | None | None | None | N |
I/R | 0.4176 | ambiguous | 0.4074 | ambiguous | -1.08 | Destabilizing | 0.974 | D | 0.648 | neutral | None | None | None | None | N |
I/S | 0.4214 | ambiguous | 0.3999 | ambiguous | -2.126 | Highly Destabilizing | 0.669 | D | 0.509 | neutral | N | 0.497586202 | None | None | N |
I/T | 0.353 | ambiguous | 0.3324 | benign | -1.906 | Destabilizing | 0.801 | D | 0.458 | neutral | D | 0.530675387 | None | None | N |
I/V | 0.091 | likely_benign | 0.0889 | benign | -1.402 | Destabilizing | 0.005 | N | 0.111 | neutral | N | 0.47527789 | None | None | N |
I/W | 0.7938 | likely_pathogenic | 0.8019 | pathogenic | -1.715 | Destabilizing | 0.998 | D | 0.656 | neutral | None | None | None | None | N |
I/Y | 0.5058 | ambiguous | 0.4929 | ambiguous | -1.466 | Destabilizing | 0.991 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.