Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7192 | 21799;21800;21801 | chr2:178723526;178723525;178723524 | chr2:179588253;179588252;179588251 |
N2AB | 6875 | 20848;20849;20850 | chr2:178723526;178723525;178723524 | chr2:179588253;179588252;179588251 |
N2A | 5948 | 18067;18068;18069 | chr2:178723526;178723525;178723524 | chr2:179588253;179588252;179588251 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1212601280 | None | 0.022 | N | 0.473 | 0.16 | 0.0884992946249 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs1212601280 | None | 0.022 | N | 0.473 | 0.16 | 0.0884992946249 | gnomAD-4.0.0 | 7.43847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.01729E-05 | 0 | 0 |
A/V | rs1560705548 | None | 0.012 | N | 0.491 | 0.179 | 0.177238962908 | gnomAD-4.0.0 | 1.59242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77716E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6727 | likely_pathogenic | 0.6458 | pathogenic | -0.617 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
A/D | 0.9377 | likely_pathogenic | 0.9145 | pathogenic | -1.543 | Destabilizing | 0.949 | D | 0.795 | deleterious | None | None | None | None | N |
A/E | 0.8601 | likely_pathogenic | 0.8227 | pathogenic | -1.346 | Destabilizing | 0.801 | D | 0.797 | deleterious | N | 0.508061446 | None | None | N |
A/F | 0.711 | likely_pathogenic | 0.6842 | pathogenic | -0.415 | Destabilizing | 0.974 | D | 0.811 | deleterious | None | None | None | None | N |
A/G | 0.3087 | likely_benign | 0.2689 | benign | -1.169 | Destabilizing | 0.801 | D | 0.748 | deleterious | N | 0.459595496 | None | None | N |
A/H | 0.9266 | likely_pathogenic | 0.9104 | pathogenic | -1.698 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
A/I | 0.4877 | ambiguous | 0.4544 | ambiguous | 0.615 | Stabilizing | 0.067 | N | 0.633 | neutral | None | None | None | None | N |
A/K | 0.9443 | likely_pathogenic | 0.9273 | pathogenic | -0.647 | Destabilizing | 0.842 | D | 0.801 | deleterious | None | None | None | None | N |
A/L | 0.3724 | ambiguous | 0.3502 | ambiguous | 0.615 | Stabilizing | 0.525 | D | 0.747 | deleterious | None | None | None | None | N |
A/M | 0.4192 | ambiguous | 0.3931 | ambiguous | 0.354 | Stabilizing | 0.974 | D | 0.795 | deleterious | None | None | None | None | N |
A/N | 0.873 | likely_pathogenic | 0.8351 | pathogenic | -0.888 | Destabilizing | 0.949 | D | 0.801 | deleterious | None | None | None | None | N |
A/P | 0.9483 | likely_pathogenic | 0.9348 | pathogenic | 0.229 | Stabilizing | 0.966 | D | 0.815 | deleterious | N | 0.506175934 | None | None | N |
A/Q | 0.8595 | likely_pathogenic | 0.8365 | pathogenic | -0.667 | Destabilizing | 0.974 | D | 0.817 | deleterious | None | None | None | None | N |
A/R | 0.8923 | likely_pathogenic | 0.8701 | pathogenic | -0.9 | Destabilizing | 0.949 | D | 0.815 | deleterious | None | None | None | None | N |
A/S | 0.2012 | likely_benign | 0.1865 | benign | -1.349 | Destabilizing | 0.136 | N | 0.533 | neutral | N | 0.432368822 | None | None | N |
A/T | 0.1456 | likely_benign | 0.133 | benign | -1.014 | Destabilizing | 0.022 | N | 0.473 | neutral | N | 0.456400475 | None | None | N |
A/V | 0.2009 | likely_benign | 0.1894 | benign | 0.229 | Stabilizing | 0.012 | N | 0.491 | neutral | N | 0.472023288 | None | None | N |
A/W | 0.9452 | likely_pathogenic | 0.9374 | pathogenic | -1.199 | Destabilizing | 0.998 | D | 0.812 | deleterious | None | None | None | None | N |
A/Y | 0.8612 | likely_pathogenic | 0.8374 | pathogenic | -0.56 | Destabilizing | 0.991 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.