Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7194 | 21805;21806;21807 | chr2:178723520;178723519;178723518 | chr2:179588247;179588246;179588245 |
N2AB | 6877 | 20854;20855;20856 | chr2:178723520;178723519;178723518 | chr2:179588247;179588246;179588245 |
N2A | 5950 | 18073;18074;18075 | chr2:178723520;178723519;178723518 | chr2:179588247;179588246;179588245 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.991 | D | 0.922 | 0.807 | 0.914077616967 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8409 | likely_pathogenic | 0.8184 | pathogenic | -2.765 | Highly Destabilizing | 0.769 | D | 0.751 | deleterious | None | None | None | None | N |
L/C | 0.8936 | likely_pathogenic | 0.8736 | pathogenic | -2.083 | Highly Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.9985 | pathogenic | -3.634 | Highly Destabilizing | 0.979 | D | 0.919 | deleterious | None | None | None | None | N |
L/E | 0.9883 | likely_pathogenic | 0.9858 | pathogenic | -3.317 | Highly Destabilizing | 0.979 | D | 0.899 | deleterious | None | None | None | None | N |
L/F | 0.6419 | likely_pathogenic | 0.5864 | pathogenic | -1.739 | Destabilizing | 0.959 | D | 0.773 | deleterious | None | None | None | None | N |
L/G | 0.9697 | likely_pathogenic | 0.9625 | pathogenic | -3.352 | Highly Destabilizing | 0.979 | D | 0.908 | deleterious | None | None | None | None | N |
L/H | 0.9839 | likely_pathogenic | 0.9809 | pathogenic | -3.083 | Highly Destabilizing | 0.998 | D | 0.913 | deleterious | None | None | None | None | N |
L/I | 0.3058 | likely_benign | 0.2949 | benign | -0.988 | Destabilizing | 0.769 | D | 0.671 | neutral | None | None | None | None | N |
L/K | 0.9827 | likely_pathogenic | 0.9795 | pathogenic | -2.273 | Highly Destabilizing | 0.959 | D | 0.895 | deleterious | None | None | None | None | N |
L/M | 0.2136 | likely_benign | 0.2041 | benign | -1.168 | Destabilizing | 0.135 | N | 0.383 | neutral | D | 0.545741037 | None | None | N |
L/N | 0.9925 | likely_pathogenic | 0.9907 | pathogenic | -3.006 | Highly Destabilizing | 0.979 | D | 0.919 | deleterious | None | None | None | None | N |
L/P | 0.9956 | likely_pathogenic | 0.9945 | pathogenic | -1.573 | Destabilizing | 0.991 | D | 0.922 | deleterious | D | 0.579355881 | None | None | N |
L/Q | 0.9636 | likely_pathogenic | 0.9594 | pathogenic | -2.66 | Highly Destabilizing | 0.946 | D | 0.903 | deleterious | D | 0.579355881 | None | None | N |
L/R | 0.9673 | likely_pathogenic | 0.962 | pathogenic | -2.325 | Highly Destabilizing | 0.946 | D | 0.903 | deleterious | D | 0.579355881 | None | None | N |
L/S | 0.9846 | likely_pathogenic | 0.9829 | pathogenic | -3.518 | Highly Destabilizing | 0.959 | D | 0.892 | deleterious | None | None | None | None | N |
L/T | 0.9334 | likely_pathogenic | 0.9296 | pathogenic | -3.039 | Highly Destabilizing | 0.959 | D | 0.817 | deleterious | None | None | None | None | N |
L/V | 0.3235 | likely_benign | 0.3281 | benign | -1.573 | Destabilizing | 0.716 | D | 0.687 | prob.neutral | D | 0.543347954 | None | None | N |
L/W | 0.926 | likely_pathogenic | 0.9149 | pathogenic | -2.158 | Highly Destabilizing | 0.998 | D | 0.897 | deleterious | None | None | None | None | N |
L/Y | 0.9465 | likely_pathogenic | 0.936 | pathogenic | -1.949 | Destabilizing | 0.979 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.