Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7203 | 21832;21833;21834 | chr2:178723493;178723492;178723491 | chr2:179588220;179588219;179588218 |
N2AB | 6886 | 20881;20882;20883 | chr2:178723493;178723492;178723491 | chr2:179588220;179588219;179588218 |
N2A | 5959 | 18100;18101;18102 | chr2:178723493;178723492;178723491 | chr2:179588220;179588219;179588218 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1374160884 | None | 0.002 | N | 0.371 | 0.158 | 0.128392430309 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/H | rs1374160884 | None | 0.002 | N | 0.371 | 0.158 | 0.128392430309 | gnomAD-4.0.0 | 2.47953E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39098E-06 | 0 | 0 |
Q/P | None | None | 0.523 | D | 0.648 | 0.38 | 0.386721274199 | gnomAD-4.0.0 | 2.46701E-05 | None | None | None | None | N | None | 2.99258E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.06336E-05 | 1.16044E-05 | 0 |
Q/R | None | None | 0.351 | N | 0.519 | 0.298 | 0.28492961333 | gnomAD-4.0.0 | 6.8526E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00953E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2612 | likely_benign | 0.276 | benign | -0.885 | Destabilizing | 0.061 | N | 0.557 | neutral | None | None | None | None | N |
Q/C | 0.6439 | likely_pathogenic | 0.6455 | pathogenic | -0.226 | Destabilizing | 0.983 | D | 0.76 | deleterious | None | None | None | None | N |
Q/D | 0.2289 | likely_benign | 0.2076 | benign | -0.522 | Destabilizing | 0.001 | N | 0.323 | neutral | None | None | None | None | N |
Q/E | 0.0761 | likely_benign | 0.0768 | benign | -0.377 | Destabilizing | 0.003 | N | 0.258 | neutral | N | 0.517703303 | None | None | N |
Q/F | 0.6646 | likely_pathogenic | 0.655 | pathogenic | -0.607 | Destabilizing | 0.264 | N | 0.759 | deleterious | None | None | None | None | N |
Q/G | 0.2568 | likely_benign | 0.2904 | benign | -1.266 | Destabilizing | 0.001 | N | 0.491 | neutral | None | None | None | None | N |
Q/H | 0.1796 | likely_benign | 0.1665 | benign | -0.951 | Destabilizing | 0.002 | N | 0.371 | neutral | N | 0.475088676 | None | None | N |
Q/I | 0.5027 | ambiguous | 0.5065 | ambiguous | 0.105 | Stabilizing | 0.593 | D | 0.753 | deleterious | None | None | None | None | N |
Q/K | 0.1435 | likely_benign | 0.1616 | benign | -0.278 | Destabilizing | 0.183 | N | 0.457 | neutral | N | 0.487262946 | None | None | N |
Q/L | 0.1767 | likely_benign | 0.1731 | benign | 0.105 | Stabilizing | 0.183 | N | 0.664 | neutral | N | 0.510900609 | None | None | N |
Q/M | 0.4093 | ambiguous | 0.4038 | ambiguous | 0.585 | Stabilizing | 0.94 | D | 0.602 | neutral | None | None | None | None | N |
Q/N | 0.2313 | likely_benign | 0.2122 | benign | -1.059 | Destabilizing | 0.001 | N | 0.336 | neutral | None | None | None | None | N |
Q/P | 0.3114 | likely_benign | 0.3603 | ambiguous | -0.194 | Destabilizing | 0.523 | D | 0.648 | neutral | D | 0.522256915 | None | None | N |
Q/R | 0.1441 | likely_benign | 0.1599 | benign | -0.267 | Destabilizing | 0.351 | N | 0.519 | neutral | N | 0.50389917 | None | None | N |
Q/S | 0.2297 | likely_benign | 0.2341 | benign | -1.214 | Destabilizing | 0.012 | N | 0.34 | neutral | None | None | None | None | N |
Q/T | 0.2636 | likely_benign | 0.284 | benign | -0.843 | Destabilizing | 0.129 | N | 0.605 | neutral | None | None | None | None | N |
Q/V | 0.3379 | likely_benign | 0.3413 | ambiguous | -0.194 | Destabilizing | 0.418 | N | 0.679 | prob.neutral | None | None | None | None | N |
Q/W | 0.489 | ambiguous | 0.5127 | ambiguous | -0.428 | Destabilizing | 0.983 | D | 0.745 | deleterious | None | None | None | None | N |
Q/Y | 0.3954 | ambiguous | 0.3838 | ambiguous | -0.202 | Destabilizing | 0.01 | N | 0.485 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.