Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7205 | 21838;21839;21840 | chr2:178723487;178723486;178723485 | chr2:179588214;179588213;179588212 |
N2AB | 6888 | 20887;20888;20889 | chr2:178723487;178723486;178723485 | chr2:179588214;179588213;179588212 |
N2A | 5961 | 18106;18107;18108 | chr2:178723487;178723486;178723485 | chr2:179588214;179588213;179588212 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs2078790720 | None | 1.0 | D | 0.794 | 0.676 | 0.720366896589 | gnomAD-4.0.0 | 1.59253E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43406E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.306 | likely_benign | 0.3761 | ambiguous | -0.548 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.573773073 | None | None | I |
G/C | 0.7176 | likely_pathogenic | 0.7851 | pathogenic | -0.865 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
G/D | 0.5633 | ambiguous | 0.6525 | pathogenic | -0.759 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/E | 0.6358 | likely_pathogenic | 0.7247 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.794 | deleterious | D | 0.629996203 | None | None | I |
G/F | 0.9513 | likely_pathogenic | 0.9682 | pathogenic | -0.738 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
G/H | 0.8822 | likely_pathogenic | 0.9199 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
G/I | 0.9276 | likely_pathogenic | 0.9589 | pathogenic | 0.018 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
G/K | 0.8383 | likely_pathogenic | 0.8922 | pathogenic | -1.036 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
G/L | 0.8886 | likely_pathogenic | 0.9253 | pathogenic | 0.018 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
G/M | 0.902 | likely_pathogenic | 0.9384 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
G/N | 0.7401 | likely_pathogenic | 0.8067 | pathogenic | -0.816 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
G/P | 0.991 | likely_pathogenic | 0.9939 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
G/Q | 0.7145 | likely_pathogenic | 0.7875 | pathogenic | -0.875 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
G/R | 0.6466 | likely_pathogenic | 0.73 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.799 | deleterious | D | 0.65533251 | None | None | I |
G/S | 0.2213 | likely_benign | 0.2813 | benign | -1.178 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
G/T | 0.666 | likely_pathogenic | 0.7576 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/V | 0.8309 | likely_pathogenic | 0.8915 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.76 | deleterious | D | 0.655534314 | None | None | I |
G/W | 0.8929 | likely_pathogenic | 0.9232 | pathogenic | -1.195 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.655736119 | None | None | I |
G/Y | 0.9297 | likely_pathogenic | 0.9551 | pathogenic | -0.698 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.