Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7211 | 21856;21857;21858 | chr2:178723469;178723468;178723467 | chr2:179588196;179588195;179588194 |
N2AB | 6894 | 20905;20906;20907 | chr2:178723469;178723468;178723467 | chr2:179588196;179588195;179588194 |
N2A | 5967 | 18124;18125;18126 | chr2:178723469;178723468;178723467 | chr2:179588196;179588195;179588194 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.37 | D | 0.242 | 0.26 | 0.546393912413 | gnomAD-4.0.0 | 1.59255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85997E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4253 | ambiguous | 0.4033 | ambiguous | -2.243 | Highly Destabilizing | 0.978 | D | 0.615 | neutral | N | 0.440909026 | None | None | N |
V/C | 0.9454 | likely_pathogenic | 0.9487 | pathogenic | -1.899 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/D | 0.9888 | likely_pathogenic | 0.9884 | pathogenic | -2.903 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | D | 0.547587462 | None | None | N |
V/E | 0.9739 | likely_pathogenic | 0.974 | pathogenic | -2.695 | Highly Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
V/F | 0.6214 | likely_pathogenic | 0.6277 | pathogenic | -1.304 | Destabilizing | 0.997 | D | 0.841 | deleterious | D | 0.529229717 | None | None | N |
V/G | 0.7356 | likely_pathogenic | 0.7095 | pathogenic | -2.771 | Highly Destabilizing | 0.999 | D | 0.829 | deleterious | N | 0.51540465 | None | None | N |
V/H | 0.9901 | likely_pathogenic | 0.9908 | pathogenic | -2.456 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/I | 0.104 | likely_benign | 0.1046 | benign | -0.77 | Destabilizing | 0.37 | N | 0.242 | neutral | D | 0.523693486 | None | None | N |
V/K | 0.9855 | likely_pathogenic | 0.9864 | pathogenic | -1.875 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
V/L | 0.5027 | ambiguous | 0.483 | ambiguous | -0.77 | Destabilizing | 0.9 | D | 0.537 | neutral | N | 0.516605964 | None | None | N |
V/M | 0.5369 | ambiguous | 0.5352 | ambiguous | -0.917 | Destabilizing | 0.998 | D | 0.755 | deleterious | None | None | None | None | N |
V/N | 0.9725 | likely_pathogenic | 0.9709 | pathogenic | -2.18 | Highly Destabilizing | 0.999 | D | 0.866 | deleterious | None | None | None | None | N |
V/P | 0.9881 | likely_pathogenic | 0.9892 | pathogenic | -1.235 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | N |
V/Q | 0.9729 | likely_pathogenic | 0.9733 | pathogenic | -2.047 | Highly Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
V/R | 0.9676 | likely_pathogenic | 0.9686 | pathogenic | -1.653 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
V/S | 0.8061 | likely_pathogenic | 0.7967 | pathogenic | -2.794 | Highly Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
V/T | 0.7139 | likely_pathogenic | 0.6917 | pathogenic | -2.449 | Highly Destabilizing | 0.992 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/W | 0.9926 | likely_pathogenic | 0.9939 | pathogenic | -1.809 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/Y | 0.963 | likely_pathogenic | 0.9641 | pathogenic | -1.472 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.