Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7212 | 21859;21860;21861 | chr2:178723466;178723465;178723464 | chr2:179588193;179588192;179588191 |
N2AB | 6895 | 20908;20909;20910 | chr2:178723466;178723465;178723464 | chr2:179588193;179588192;179588191 |
N2A | 5968 | 18127;18128;18129 | chr2:178723466;178723465;178723464 | chr2:179588193;179588192;179588191 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.794 | N | 0.563 | 0.338 | 0.682465373879 | gnomAD-4.0.0 | 2.05334E-06 | None | None | None | None | N | None | 2.98954E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79926E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0866 | likely_benign | 0.089 | benign | -0.746 | Destabilizing | 0.001 | N | 0.129 | neutral | N | 0.492213696 | None | None | N |
S/C | 0.1329 | likely_benign | 0.1504 | benign | -0.741 | Destabilizing | 0.936 | D | 0.478 | neutral | D | 0.531526533 | None | None | N |
S/D | 0.3791 | ambiguous | 0.3972 | ambiguous | -0.85 | Destabilizing | 0.418 | N | 0.401 | neutral | None | None | None | None | N |
S/E | 0.4448 | ambiguous | 0.4311 | ambiguous | -0.829 | Destabilizing | 0.129 | N | 0.352 | neutral | None | None | None | None | N |
S/F | 0.1622 | likely_benign | 0.168 | benign | -0.862 | Destabilizing | 0.794 | D | 0.563 | neutral | N | 0.516384792 | None | None | N |
S/G | 0.1134 | likely_benign | 0.1263 | benign | -1.011 | Destabilizing | 0.129 | N | 0.353 | neutral | None | None | None | None | N |
S/H | 0.273 | likely_benign | 0.2623 | benign | -1.466 | Destabilizing | 0.836 | D | 0.489 | neutral | None | None | None | None | N |
S/I | 0.1796 | likely_benign | 0.1953 | benign | -0.143 | Destabilizing | 0.01 | N | 0.459 | neutral | None | None | None | None | N |
S/K | 0.5217 | ambiguous | 0.5056 | ambiguous | -0.84 | Destabilizing | 0.129 | N | 0.352 | neutral | None | None | None | None | N |
S/L | 0.1058 | likely_benign | 0.1167 | benign | -0.143 | Destabilizing | 0.129 | N | 0.537 | neutral | None | None | None | None | N |
S/M | 0.2097 | likely_benign | 0.2176 | benign | 0.097 | Stabilizing | 0.836 | D | 0.489 | neutral | None | None | None | None | N |
S/N | 0.1275 | likely_benign | 0.1377 | benign | -0.938 | Destabilizing | 0.418 | N | 0.393 | neutral | None | None | None | None | N |
S/P | 0.8371 | likely_pathogenic | 0.8556 | pathogenic | -0.31 | Destabilizing | 0.523 | D | 0.497 | neutral | D | 0.542629349 | None | None | N |
S/Q | 0.423 | ambiguous | 0.407 | ambiguous | -1.107 | Destabilizing | 0.027 | N | 0.279 | neutral | None | None | None | None | N |
S/R | 0.3737 | ambiguous | 0.3706 | ambiguous | -0.706 | Destabilizing | 0.002 | N | 0.337 | neutral | None | None | None | None | N |
S/T | 0.0764 | likely_benign | 0.0808 | benign | -0.878 | Destabilizing | 0.007 | N | 0.147 | neutral | N | 0.470872148 | None | None | N |
S/V | 0.1937 | likely_benign | 0.2073 | benign | -0.31 | Destabilizing | 0.129 | N | 0.541 | neutral | None | None | None | None | N |
S/W | 0.2583 | likely_benign | 0.251 | benign | -0.857 | Destabilizing | 0.983 | D | 0.581 | neutral | None | None | None | None | N |
S/Y | 0.1571 | likely_benign | 0.1597 | benign | -0.574 | Destabilizing | 0.921 | D | 0.564 | neutral | N | 0.510700026 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.