Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7214 | 21865;21866;21867 | chr2:178723460;178723459;178723458 | chr2:179588187;179588186;179588185 |
N2AB | 6897 | 20914;20915;20916 | chr2:178723460;178723459;178723458 | chr2:179588187;179588186;179588185 |
N2A | 5970 | 18133;18134;18135 | chr2:178723460;178723459;178723458 | chr2:179588187;179588186;179588185 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs998292768 | None | None | N | 0.093 | 0.25 | 0.0401082797425 | gnomAD-4.0.0 | 3.18527E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72007E-06 | 0 | 0 |
N/S | rs755600935 | 0.258 | 0.005 | N | 0.178 | 0.1 | 0.117506650769 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1019 | likely_benign | 0.1045 | benign | -0.137 | Destabilizing | None | N | 0.104 | neutral | None | None | None | None | I |
N/C | 0.2298 | likely_benign | 0.256 | benign | 0.231 | Stabilizing | 0.864 | D | 0.179 | neutral | None | None | None | None | I |
N/D | 0.0513 | likely_benign | 0.0565 | benign | -0.029 | Destabilizing | None | N | 0.093 | neutral | N | 0.354453196 | None | None | I |
N/E | 0.1101 | likely_benign | 0.1088 | benign | -0.1 | Destabilizing | None | N | 0.128 | neutral | None | None | None | None | I |
N/F | 0.3217 | likely_benign | 0.337 | benign | -0.748 | Destabilizing | 0.628 | D | 0.233 | neutral | None | None | None | None | I |
N/G | 0.1436 | likely_benign | 0.1545 | benign | -0.217 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | I |
N/H | 0.0849 | likely_benign | 0.0846 | benign | -0.296 | Destabilizing | 0.295 | N | 0.205 | neutral | N | 0.473029806 | None | None | I |
N/I | 0.1176 | likely_benign | 0.1173 | benign | -0.026 | Destabilizing | 0.106 | N | 0.255 | neutral | N | 0.452385175 | None | None | I |
N/K | 0.1297 | likely_benign | 0.1234 | benign | 0.104 | Stabilizing | None | N | 0.141 | neutral | N | 0.424350424 | None | None | I |
N/L | 0.1458 | likely_benign | 0.145 | benign | -0.026 | Destabilizing | 0.031 | N | 0.235 | neutral | None | None | None | None | I |
N/M | 0.2251 | likely_benign | 0.2247 | benign | 0.16 | Stabilizing | 0.628 | D | 0.219 | neutral | None | None | None | None | I |
N/P | 0.2939 | likely_benign | 0.2988 | benign | -0.041 | Destabilizing | 0.136 | N | 0.344 | neutral | None | None | None | None | I |
N/Q | 0.1566 | likely_benign | 0.1527 | benign | -0.22 | Destabilizing | 0.038 | N | 0.247 | neutral | None | None | None | None | I |
N/R | 0.1483 | likely_benign | 0.1466 | benign | 0.172 | Stabilizing | 0.038 | N | 0.243 | neutral | None | None | None | None | I |
N/S | 0.0653 | likely_benign | 0.0649 | benign | 0.032 | Stabilizing | 0.005 | N | 0.178 | neutral | N | 0.413477283 | None | None | I |
N/T | 0.0912 | likely_benign | 0.0901 | benign | 0.063 | Stabilizing | 0.024 | N | 0.219 | neutral | N | 0.443610976 | None | None | I |
N/V | 0.114 | likely_benign | 0.1144 | benign | -0.041 | Destabilizing | 0.031 | N | 0.239 | neutral | None | None | None | None | I |
N/W | 0.5583 | ambiguous | 0.5814 | pathogenic | -0.878 | Destabilizing | 0.864 | D | 0.187 | neutral | None | None | None | None | I |
N/Y | 0.1122 | likely_benign | 0.118 | benign | -0.561 | Destabilizing | 0.56 | D | 0.249 | neutral | N | 0.473029806 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.