Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7220 | 21883;21884;21885 | chr2:178723442;178723441;178723440 | chr2:179588169;179588168;179588167 |
N2AB | 6903 | 20932;20933;20934 | chr2:178723442;178723441;178723440 | chr2:179588169;179588168;179588167 |
N2A | 5976 | 18151;18152;18153 | chr2:178723442;178723441;178723440 | chr2:179588169;179588168;179588167 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | 1.0 | N | 0.877 | 0.439 | 0.809519752258 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5016 | ambiguous | 0.5308 | ambiguous | -1.726 | Destabilizing | 0.998 | D | 0.64 | neutral | None | None | None | None | N |
C/D | 0.8516 | likely_pathogenic | 0.8839 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
C/E | 0.917 | likely_pathogenic | 0.9457 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
C/F | 0.333 | likely_benign | 0.426 | ambiguous | -1.117 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.497809557 | None | None | N |
C/G | 0.2796 | likely_benign | 0.3064 | benign | -2.021 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.533366188 | None | None | N |
C/H | 0.6463 | likely_pathogenic | 0.7368 | pathogenic | -1.975 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
C/I | 0.6774 | likely_pathogenic | 0.7395 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
C/K | 0.8628 | likely_pathogenic | 0.9138 | pathogenic | -0.813 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
C/L | 0.6483 | likely_pathogenic | 0.7039 | pathogenic | -0.973 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
C/M | 0.7877 | likely_pathogenic | 0.8248 | pathogenic | -0.115 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
C/N | 0.731 | likely_pathogenic | 0.7736 | pathogenic | -0.723 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
C/P | 0.9908 | likely_pathogenic | 0.9929 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
C/Q | 0.7561 | likely_pathogenic | 0.8408 | pathogenic | -0.667 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
C/R | 0.5051 | ambiguous | 0.6312 | pathogenic | -0.666 | Destabilizing | 1.0 | D | 0.889 | deleterious | N | 0.487338625 | None | None | N |
C/S | 0.3407 | ambiguous | 0.3516 | ambiguous | -1.303 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.501925774 | None | None | N |
C/T | 0.5728 | likely_pathogenic | 0.5958 | pathogenic | -1.034 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
C/V | 0.5659 | likely_pathogenic | 0.6289 | pathogenic | -1.198 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
C/W | 0.7375 | likely_pathogenic | 0.8109 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.495442927 | None | None | N |
C/Y | 0.5197 | ambiguous | 0.6401 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.492302602 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.