Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7224 | 21895;21896;21897 | chr2:178723430;178723429;178723428 | chr2:179588157;179588156;179588155 |
N2AB | 6907 | 20944;20945;20946 | chr2:178723430;178723429;178723428 | chr2:179588157;179588156;179588155 |
N2A | 5980 | 18163;18164;18165 | chr2:178723430;178723429;178723428 | chr2:179588157;179588156;179588155 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs747568681 | -1.355 | 1.0 | D | 0.835 | 0.578 | 0.639540451167 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.31E-05 | None | 0 | 0 | 0 |
L/F | rs747568681 | -1.355 | 1.0 | D | 0.835 | 0.578 | 0.639540451167 | gnomAD-4.0.0 | 1.59592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43947E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8749 | likely_pathogenic | 0.8953 | pathogenic | -2.606 | Highly Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
L/C | 0.8511 | likely_pathogenic | 0.8701 | pathogenic | -1.865 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/D | 0.9979 | likely_pathogenic | 0.9986 | pathogenic | -2.916 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/E | 0.9886 | likely_pathogenic | 0.9914 | pathogenic | -2.588 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/F | 0.4925 | ambiguous | 0.6049 | pathogenic | -1.561 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.5244156 | None | None | N |
L/G | 0.9724 | likely_pathogenic | 0.9783 | pathogenic | -3.244 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/H | 0.9598 | likely_pathogenic | 0.9723 | pathogenic | -2.891 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.55761237 | None | None | N |
L/I | 0.1645 | likely_benign | 0.1741 | benign | -0.703 | Destabilizing | 0.999 | D | 0.55 | neutral | N | 0.50219306 | None | None | N |
L/K | 0.9842 | likely_pathogenic | 0.988 | pathogenic | -1.992 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/M | 0.3164 | likely_benign | 0.3663 | ambiguous | -0.791 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/N | 0.9843 | likely_pathogenic | 0.9877 | pathogenic | -2.652 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/P | 0.9877 | likely_pathogenic | 0.9905 | pathogenic | -1.325 | Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.55761237 | None | None | N |
L/Q | 0.9502 | likely_pathogenic | 0.9611 | pathogenic | -2.278 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/R | 0.9561 | likely_pathogenic | 0.9646 | pathogenic | -2.077 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.55761237 | None | None | N |
L/S | 0.97 | likely_pathogenic | 0.979 | pathogenic | -3.337 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
L/T | 0.9181 | likely_pathogenic | 0.9339 | pathogenic | -2.827 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
L/V | 0.1817 | likely_benign | 0.186 | benign | -1.325 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.485108628 | None | None | N |
L/W | 0.9137 | likely_pathogenic | 0.9458 | pathogenic | -1.934 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/Y | 0.8962 | likely_pathogenic | 0.9276 | pathogenic | -1.668 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.