Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7225 | 21898;21899;21900 | chr2:178723427;178723426;178723425 | chr2:179588154;179588153;179588152 |
N2AB | 6908 | 20947;20948;20949 | chr2:178723427;178723426;178723425 | chr2:179588154;179588153;179588152 |
N2A | 5981 | 18166;18167;18168 | chr2:178723427;178723426;178723425 | chr2:179588154;179588153;179588152 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.454 | N | 0.343 | 0.197 | 0.366085729538 | gnomAD-4.0.0 | 1.59947E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87256E-06 | 0 | 0 |
F/S | rs780534846 | -1.853 | 0.051 | N | 0.318 | 0.219 | 0.570720304676 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.66E-05 | None | 0 | 8.95E-06 | 0 |
F/S | rs780534846 | -1.853 | 0.051 | N | 0.318 | 0.219 | 0.570720304676 | gnomAD-4.0.0 | 2.74246E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80157E-06 | 2.3316E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.256 | likely_benign | 0.28 | benign | -1.51 | Destabilizing | 0.525 | D | 0.398 | neutral | None | None | None | None | N |
F/C | 0.3267 | likely_benign | 0.3312 | benign | -0.706 | Destabilizing | 0.997 | D | 0.429 | neutral | N | 0.499695661 | None | None | N |
F/D | 0.441 | ambiguous | 0.4731 | ambiguous | 0.447 | Stabilizing | 0.949 | D | 0.443 | neutral | None | None | None | None | N |
F/E | 0.5527 | ambiguous | 0.5458 | ambiguous | 0.476 | Stabilizing | 0.949 | D | 0.451 | neutral | None | None | None | None | N |
F/G | 0.5851 | likely_pathogenic | 0.6206 | pathogenic | -1.77 | Destabilizing | 0.728 | D | 0.459 | neutral | None | None | None | None | N |
F/H | 0.2934 | likely_benign | 0.2837 | benign | -0.007 | Destabilizing | 0.949 | D | 0.407 | neutral | None | None | None | None | N |
F/I | 0.1445 | likely_benign | 0.1472 | benign | -0.787 | Destabilizing | 0.801 | D | 0.389 | neutral | N | 0.444072336 | None | None | N |
F/K | 0.6084 | likely_pathogenic | 0.589 | pathogenic | -0.572 | Destabilizing | 0.949 | D | 0.448 | neutral | None | None | None | None | N |
F/L | 0.6244 | likely_pathogenic | 0.6185 | pathogenic | -0.787 | Destabilizing | 0.454 | N | 0.343 | neutral | N | 0.445053771 | None | None | N |
F/M | 0.3961 | ambiguous | 0.3923 | ambiguous | -0.637 | Destabilizing | 0.991 | D | 0.397 | neutral | None | None | None | None | N |
F/N | 0.3137 | likely_benign | 0.3484 | ambiguous | -0.57 | Destabilizing | 0.949 | D | 0.451 | neutral | None | None | None | None | N |
F/P | 0.9542 | likely_pathogenic | 0.9597 | pathogenic | -1.013 | Destabilizing | 0.974 | D | 0.487 | neutral | None | None | None | None | N |
F/Q | 0.4977 | ambiguous | 0.478 | ambiguous | -0.622 | Destabilizing | 0.974 | D | 0.483 | neutral | None | None | None | None | N |
F/R | 0.4412 | ambiguous | 0.4261 | ambiguous | 0.022 | Stabilizing | 0.949 | D | 0.485 | neutral | None | None | None | None | N |
F/S | 0.1434 | likely_benign | 0.1641 | benign | -1.38 | Destabilizing | 0.051 | N | 0.318 | neutral | N | 0.452363745 | None | None | N |
F/T | 0.1858 | likely_benign | 0.2061 | benign | -1.26 | Destabilizing | 0.029 | N | 0.223 | neutral | None | None | None | None | N |
F/V | 0.1511 | likely_benign | 0.1478 | benign | -1.013 | Destabilizing | 0.669 | D | 0.389 | neutral | N | 0.464447608 | None | None | N |
F/W | 0.3968 | ambiguous | 0.3843 | ambiguous | -0.119 | Destabilizing | 0.993 | D | 0.401 | neutral | None | None | None | None | N |
F/Y | 0.1222 | likely_benign | 0.1185 | benign | -0.274 | Destabilizing | 0.012 | N | 0.277 | neutral | N | 0.465141041 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.