Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7226 | 21901;21902;21903 | chr2:178723424;178723423;178723422 | chr2:179588151;179588150;179588149 |
N2AB | 6909 | 20950;20951;20952 | chr2:178723424;178723423;178723422 | chr2:179588151;179588150;179588149 |
N2A | 5982 | 18169;18170;18171 | chr2:178723424;178723423;178723422 | chr2:179588151;179588150;179588149 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.946 | D | 0.813 | 0.746 | 0.666365135816 | gnomAD-4.0.0 | 6.8583E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00954E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6921 | likely_pathogenic | 0.7529 | pathogenic | -1.848 | Destabilizing | 0.834 | D | 0.667 | neutral | D | 0.62223297 | None | None | N |
V/C | 0.9326 | likely_pathogenic | 0.9467 | pathogenic | -1.309 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
V/D | 0.9831 | likely_pathogenic | 0.9883 | pathogenic | -2.127 | Highly Destabilizing | 0.979 | D | 0.793 | deleterious | None | None | None | None | N |
V/E | 0.9431 | likely_pathogenic | 0.96 | pathogenic | -1.933 | Destabilizing | 0.973 | D | 0.787 | deleterious | D | 0.648376494 | None | None | N |
V/F | 0.7364 | likely_pathogenic | 0.7726 | pathogenic | -1.027 | Destabilizing | 0.959 | D | 0.793 | deleterious | None | None | None | None | N |
V/G | 0.8134 | likely_pathogenic | 0.8632 | pathogenic | -2.36 | Highly Destabilizing | 0.973 | D | 0.755 | deleterious | D | 0.648376494 | None | None | N |
V/H | 0.984 | likely_pathogenic | 0.9876 | pathogenic | -2.08 | Highly Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
V/I | 0.1026 | likely_benign | 0.0948 | benign | -0.44 | Destabilizing | 0.02 | N | 0.559 | neutral | None | None | None | None | N |
V/K | 0.9619 | likely_pathogenic | 0.9709 | pathogenic | -1.495 | Destabilizing | 0.979 | D | 0.788 | deleterious | None | None | None | None | N |
V/L | 0.513 | ambiguous | 0.5185 | ambiguous | -0.44 | Destabilizing | 0.263 | N | 0.685 | prob.neutral | D | 0.620214927 | None | None | N |
V/M | 0.5774 | likely_pathogenic | 0.6111 | pathogenic | -0.494 | Destabilizing | 0.946 | D | 0.813 | deleterious | D | 0.631953525 | None | None | N |
V/N | 0.9507 | likely_pathogenic | 0.9641 | pathogenic | -1.709 | Destabilizing | 0.993 | D | 0.801 | deleterious | None | None | None | None | N |
V/P | 0.9267 | likely_pathogenic | 0.9453 | pathogenic | -0.881 | Destabilizing | 0.993 | D | 0.805 | deleterious | None | None | None | None | N |
V/Q | 0.9345 | likely_pathogenic | 0.9495 | pathogenic | -1.578 | Destabilizing | 0.993 | D | 0.813 | deleterious | None | None | None | None | N |
V/R | 0.9347 | likely_pathogenic | 0.9469 | pathogenic | -1.33 | Destabilizing | 0.979 | D | 0.799 | deleterious | None | None | None | None | N |
V/S | 0.8243 | likely_pathogenic | 0.8705 | pathogenic | -2.346 | Highly Destabilizing | 0.979 | D | 0.759 | deleterious | None | None | None | None | N |
V/T | 0.7382 | likely_pathogenic | 0.7947 | pathogenic | -2.015 | Highly Destabilizing | 0.87 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/W | 0.9911 | likely_pathogenic | 0.9928 | pathogenic | -1.514 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
V/Y | 0.9697 | likely_pathogenic | 0.9728 | pathogenic | -1.116 | Destabilizing | 0.979 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.