Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7231 | 21916;21917;21918 | chr2:178723316;178723315;178723314 | chr2:179588043;179588042;179588041 |
N2AB | 6914 | 20965;20966;20967 | chr2:178723316;178723315;178723314 | chr2:179588043;179588042;179588041 |
N2A | 5987 | 18184;18185;18186 | chr2:178723316;178723315;178723314 | chr2:179588043;179588042;179588041 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | None | None | 0.012 | N | 0.398 | 0.162 | 0.132336055621 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
A/T | rs1486491329 | -0.343 | None | N | 0.169 | 0.064 | 0.0297737177859 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.32E-05 | None | 0 | 0 | 0 |
A/T | rs1486491329 | -0.343 | None | N | 0.169 | 0.064 | 0.0297737177859 | gnomAD-4.0.0 | 2.74132E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.6581E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3294 | likely_benign | 0.3101 | benign | -0.827 | Destabilizing | 0.356 | N | 0.435 | neutral | None | None | None | None | N |
A/D | 0.2205 | likely_benign | 0.2254 | benign | -0.265 | Destabilizing | 0.072 | N | 0.423 | neutral | None | None | None | None | N |
A/E | 0.1542 | likely_benign | 0.1518 | benign | -0.246 | Destabilizing | 0.012 | N | 0.398 | neutral | N | 0.49399415 | None | None | N |
A/F | 0.1653 | likely_benign | 0.1722 | benign | -0.599 | Destabilizing | 0.214 | N | 0.497 | neutral | None | None | None | None | N |
A/G | 0.1409 | likely_benign | 0.1418 | benign | -0.903 | Destabilizing | 0.024 | N | 0.317 | neutral | N | 0.487331262 | None | None | N |
A/H | 0.2428 | likely_benign | 0.23 | benign | -0.999 | Destabilizing | 0.001 | N | 0.378 | neutral | None | None | None | None | N |
A/I | 0.1034 | likely_benign | 0.0991 | benign | 0.084 | Stabilizing | 0.006 | N | 0.412 | neutral | None | None | None | None | N |
A/K | 0.159 | likely_benign | 0.1584 | benign | -0.697 | Destabilizing | None | N | 0.244 | neutral | None | None | None | None | N |
A/L | 0.0991 | likely_benign | 0.095 | benign | 0.084 | Stabilizing | 0.016 | N | 0.407 | neutral | None | None | None | None | N |
A/M | 0.1233 | likely_benign | 0.1224 | benign | -0.148 | Destabilizing | 0.214 | N | 0.423 | neutral | None | None | None | None | N |
A/N | 0.1517 | likely_benign | 0.1561 | benign | -0.555 | Destabilizing | 0.072 | N | 0.418 | neutral | None | None | None | None | N |
A/P | 0.5481 | ambiguous | 0.6112 | pathogenic | -0.099 | Destabilizing | 0.106 | N | 0.445 | neutral | N | 0.475810373 | None | None | N |
A/Q | 0.1791 | likely_benign | 0.166 | benign | -0.574 | Destabilizing | 0.038 | N | 0.443 | neutral | None | None | None | None | N |
A/R | 0.1372 | likely_benign | 0.1305 | benign | -0.589 | Destabilizing | None | N | 0.298 | neutral | None | None | None | None | N |
A/S | 0.0859 | likely_benign | 0.0842 | benign | -1.054 | Destabilizing | 0.001 | N | 0.225 | neutral | N | 0.464191318 | None | None | N |
A/T | 0.0618 | likely_benign | 0.0613 | benign | -0.905 | Destabilizing | None | N | 0.169 | neutral | N | 0.432041614 | None | None | N |
A/V | 0.0719 | likely_benign | 0.0663 | benign | -0.099 | Destabilizing | None | N | 0.153 | neutral | N | 0.467829056 | None | None | N |
A/W | 0.4912 | ambiguous | 0.5039 | ambiguous | -0.968 | Destabilizing | 0.864 | D | 0.481 | neutral | None | None | None | None | N |
A/Y | 0.2412 | likely_benign | 0.2526 | benign | -0.485 | Destabilizing | 0.214 | N | 0.505 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.