Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7233 | 21922;21923;21924 | chr2:178723310;178723309;178723308 | chr2:179588037;179588036;179588035 |
N2AB | 6916 | 20971;20972;20973 | chr2:178723310;178723309;178723308 | chr2:179588037;179588036;179588035 |
N2A | 5989 | 18190;18191;18192 | chr2:178723310;178723309;178723308 | chr2:179588037;179588036;179588035 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs370679926 | None | 0.055 | N | 0.218 | 0.136 | 0.374434639691 | gnomAD-4.0.0 | 1.37052E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80061E-06 | 0 | 0 |
L/M | None | None | 0.001 | N | 0.126 | 0.103 | 0.400899426204 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1174 | likely_benign | 0.137 | benign | -0.614 | Destabilizing | 0.007 | N | 0.135 | neutral | None | None | None | None | I |
L/C | 0.3421 | ambiguous | 0.3822 | ambiguous | -0.608 | Destabilizing | 0.356 | N | 0.297 | neutral | None | None | None | None | I |
L/D | 0.39 | ambiguous | 0.42 | ambiguous | -0.126 | Destabilizing | 0.072 | N | 0.327 | neutral | None | None | None | None | I |
L/E | 0.163 | likely_benign | 0.1712 | benign | -0.211 | Destabilizing | 0.031 | N | 0.237 | neutral | None | None | None | None | I |
L/F | 0.0904 | likely_benign | 0.109 | benign | -0.575 | Destabilizing | 0.055 | N | 0.218 | neutral | N | 0.459379098 | None | None | I |
L/G | 0.2484 | likely_benign | 0.2682 | benign | -0.786 | Destabilizing | 0.031 | N | 0.217 | neutral | None | None | None | None | I |
L/H | 0.142 | likely_benign | 0.1626 | benign | -0.031 | Destabilizing | 0.628 | D | 0.288 | neutral | None | None | None | None | I |
L/I | 0.0535 | likely_benign | 0.0585 | benign | -0.279 | Destabilizing | 0.002 | N | 0.091 | neutral | None | None | None | None | I |
L/K | 0.1466 | likely_benign | 0.1493 | benign | -0.353 | Destabilizing | None | N | 0.16 | neutral | None | None | None | None | I |
L/M | 0.0808 | likely_benign | 0.0957 | benign | -0.373 | Destabilizing | 0.001 | N | 0.126 | neutral | N | 0.477317252 | None | None | I |
L/N | 0.1866 | likely_benign | 0.2022 | benign | -0.144 | Destabilizing | 0.072 | N | 0.327 | neutral | None | None | None | None | I |
L/P | 0.5284 | ambiguous | 0.4843 | ambiguous | -0.357 | Destabilizing | 0.136 | N | 0.381 | neutral | None | None | None | None | I |
L/Q | 0.0856 | likely_benign | 0.0937 | benign | -0.358 | Destabilizing | 0.072 | N | 0.363 | neutral | None | None | None | None | I |
L/R | 0.1106 | likely_benign | 0.1132 | benign | 0.202 | Stabilizing | 0.038 | N | 0.293 | neutral | None | None | None | None | I |
L/S | 0.1113 | likely_benign | 0.1329 | benign | -0.615 | Destabilizing | 0.001 | N | 0.149 | neutral | N | 0.46898577 | None | None | I |
L/T | 0.0919 | likely_benign | 0.1021 | benign | -0.591 | Destabilizing | 0.016 | N | 0.228 | neutral | None | None | None | None | I |
L/V | 0.0473 | likely_benign | 0.053 | benign | -0.357 | Destabilizing | None | N | 0.089 | neutral | N | 0.37064836 | None | None | I |
L/W | 0.1858 | likely_benign | 0.217 | benign | -0.592 | Destabilizing | 0.828 | D | 0.266 | neutral | N | 0.459886077 | None | None | I |
L/Y | 0.2305 | likely_benign | 0.2732 | benign | -0.347 | Destabilizing | 0.356 | N | 0.385 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.