Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7235 | 21928;21929;21930 | chr2:178723304;178723303;178723302 | chr2:179588031;179588030;179588029 |
N2AB | 6918 | 20977;20978;20979 | chr2:178723304;178723303;178723302 | chr2:179588031;179588030;179588029 |
N2A | 5991 | 18196;18197;18198 | chr2:178723304;178723303;178723302 | chr2:179588031;179588030;179588029 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | None | N | 0.18 | 0.125 | 0.453867917445 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/S | rs772506057 | -0.055 | 0.012 | N | 0.311 | 0.1 | 0.0762999501168 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 1.00281E-04 | 0 | None | 0 | None | 0 | 0 | 0 |
R/S | rs772506057 | -0.055 | 0.012 | N | 0.311 | 0.1 | 0.0762999501168 | gnomAD-4.0.0 | 1.59434E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.77783E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2834 | likely_benign | 0.283 | benign | -0.833 | Destabilizing | 0.007 | N | 0.275 | neutral | None | None | None | None | I |
R/C | 0.2409 | likely_benign | 0.2432 | benign | -0.777 | Destabilizing | 0.864 | D | 0.259 | neutral | None | None | None | None | I |
R/D | 0.5543 | ambiguous | 0.5706 | pathogenic | 0.171 | Stabilizing | 0.031 | N | 0.375 | neutral | None | None | None | None | I |
R/E | 0.2503 | likely_benign | 0.2558 | benign | 0.298 | Stabilizing | 0.007 | N | 0.227 | neutral | None | None | None | None | I |
R/F | 0.5179 | ambiguous | 0.5245 | ambiguous | -0.684 | Destabilizing | 0.628 | D | 0.309 | neutral | None | None | None | None | I |
R/G | 0.1567 | likely_benign | 0.1619 | benign | -1.127 | Destabilizing | None | N | 0.18 | neutral | N | 0.496194667 | None | None | I |
R/H | 0.1269 | likely_benign | 0.1341 | benign | -1.36 | Destabilizing | 0.356 | N | 0.355 | neutral | None | None | None | None | I |
R/I | 0.2338 | likely_benign | 0.2487 | benign | -0.046 | Destabilizing | 0.295 | N | 0.349 | neutral | N | 0.521204968 | None | None | I |
R/K | 0.0633 | likely_benign | 0.0609 | benign | -0.62 | Destabilizing | None | N | 0.148 | neutral | N | 0.394104875 | None | None | I |
R/L | 0.2173 | likely_benign | 0.2178 | benign | -0.046 | Destabilizing | 0.031 | N | 0.345 | neutral | None | None | None | None | I |
R/M | 0.1813 | likely_benign | 0.189 | benign | -0.431 | Destabilizing | 0.628 | D | 0.33 | neutral | None | None | None | None | I |
R/N | 0.3882 | ambiguous | 0.3953 | ambiguous | -0.178 | Destabilizing | 0.031 | N | 0.297 | neutral | None | None | None | None | I |
R/P | 0.2698 | likely_benign | 0.2331 | benign | -0.288 | Destabilizing | 0.136 | N | 0.432 | neutral | None | None | None | None | I |
R/Q | 0.0988 | likely_benign | 0.1014 | benign | -0.334 | Destabilizing | 0.003 | N | 0.213 | neutral | None | None | None | None | I |
R/S | 0.3243 | likely_benign | 0.336 | benign | -1.009 | Destabilizing | 0.012 | N | 0.311 | neutral | N | 0.497386746 | None | None | I |
R/T | 0.1685 | likely_benign | 0.1816 | benign | -0.697 | Destabilizing | 0.024 | N | 0.348 | neutral | N | 0.476915473 | None | None | I |
R/V | 0.2949 | likely_benign | 0.3057 | benign | -0.288 | Destabilizing | 0.072 | N | 0.435 | neutral | None | None | None | None | I |
R/W | 0.2105 | likely_benign | 0.2222 | benign | -0.352 | Destabilizing | 0.864 | D | 0.261 | neutral | None | None | None | None | I |
R/Y | 0.3876 | ambiguous | 0.388 | ambiguous | -0.067 | Destabilizing | 0.356 | N | 0.337 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.