Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7236 | 21931;21932;21933 | chr2:178723301;178723300;178723299 | chr2:179588028;179588027;179588026 |
N2AB | 6919 | 20980;20981;20982 | chr2:178723301;178723300;178723299 | chr2:179588028;179588027;179588026 |
N2A | 5992 | 18199;18200;18201 | chr2:178723301;178723300;178723299 | chr2:179588028;179588027;179588026 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.026 | N | 0.256 | 0.136 | 0.124217242631 | gnomAD-4.0.0 | 6.16289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09903E-06 | 0 | 0 |
L/S | rs746222807 | -2.072 | 0.968 | N | 0.759 | 0.397 | 0.700023067923 | gnomAD-2.1.1 | 2.16E-05 | None | None | None | None | N | None | 2.48715E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/S | rs746222807 | -2.072 | 0.968 | N | 0.759 | 0.397 | 0.700023067923 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 1.44795E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/S | rs746222807 | -2.072 | 0.968 | N | 0.759 | 0.397 | 0.700023067923 | gnomAD-4.0.0 | 9.30223E-06 | None | None | None | None | N | None | 2.00567E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7875 | likely_pathogenic | 0.8329 | pathogenic | -1.747 | Destabilizing | 0.919 | D | 0.657 | neutral | None | None | None | None | N |
L/C | 0.8811 | likely_pathogenic | 0.8907 | pathogenic | -1.191 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
L/D | 0.9925 | likely_pathogenic | 0.9931 | pathogenic | -0.567 | Destabilizing | 0.976 | D | 0.839 | deleterious | None | None | None | None | N |
L/E | 0.9656 | likely_pathogenic | 0.9686 | pathogenic | -0.482 | Destabilizing | 0.952 | D | 0.809 | deleterious | None | None | None | None | N |
L/F | 0.4926 | ambiguous | 0.487 | ambiguous | -0.999 | Destabilizing | 0.059 | N | 0.456 | neutral | N | 0.488905792 | None | None | N |
L/G | 0.9536 | likely_pathogenic | 0.9547 | pathogenic | -2.159 | Highly Destabilizing | 0.988 | D | 0.827 | deleterious | None | None | None | None | N |
L/H | 0.9287 | likely_pathogenic | 0.9356 | pathogenic | -1.314 | Destabilizing | 0.997 | D | 0.819 | deleterious | None | None | None | None | N |
L/I | 0.1608 | likely_benign | 0.1958 | benign | -0.655 | Destabilizing | 0.026 | N | 0.256 | neutral | N | 0.469787579 | None | None | N |
L/K | 0.9552 | likely_pathogenic | 0.9572 | pathogenic | -1.016 | Destabilizing | 0.952 | D | 0.759 | deleterious | None | None | None | None | N |
L/M | 0.2434 | likely_benign | 0.2466 | benign | -0.648 | Destabilizing | 0.976 | D | 0.649 | neutral | None | None | None | None | N |
L/N | 0.9533 | likely_pathogenic | 0.956 | pathogenic | -0.909 | Destabilizing | 0.988 | D | 0.839 | deleterious | None | None | None | None | N |
L/P | 0.4303 | ambiguous | 0.4957 | ambiguous | -0.989 | Destabilizing | 0.996 | D | 0.845 | deleterious | None | None | None | None | N |
L/Q | 0.8693 | likely_pathogenic | 0.8801 | pathogenic | -0.936 | Destabilizing | 0.702 | D | 0.611 | neutral | None | None | None | None | N |
L/R | 0.9281 | likely_pathogenic | 0.9365 | pathogenic | -0.645 | Destabilizing | 0.976 | D | 0.788 | deleterious | None | None | None | None | N |
L/S | 0.939 | likely_pathogenic | 0.9521 | pathogenic | -1.734 | Destabilizing | 0.968 | D | 0.759 | deleterious | N | 0.486525935 | None | None | N |
L/T | 0.8392 | likely_pathogenic | 0.8767 | pathogenic | -1.508 | Destabilizing | 0.976 | D | 0.759 | deleterious | None | None | None | None | N |
L/V | 0.2228 | likely_benign | 0.2813 | benign | -0.989 | Destabilizing | 0.64 | D | 0.579 | neutral | N | 0.477042507 | None | None | N |
L/W | 0.8956 | likely_pathogenic | 0.8976 | pathogenic | -1.072 | Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
L/Y | 0.9369 | likely_pathogenic | 0.938 | pathogenic | -0.836 | Destabilizing | 0.952 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.