Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7239 | 21940;21941;21942 | chr2:178723292;178723291;178723290 | chr2:179588019;179588018;179588017 |
N2AB | 6922 | 20989;20990;20991 | chr2:178723292;178723291;178723290 | chr2:179588019;179588018;179588017 |
N2A | 5995 | 18208;18209;18210 | chr2:178723292;178723291;178723290 | chr2:179588019;179588018;179588017 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.007 | N | 0.279 | 0.111 | 0.165133752707 | gnomAD-4.0.0 | 3.1845E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2038 | likely_benign | 0.2131 | benign | -0.341 | Destabilizing | 0.002 | N | 0.309 | neutral | None | None | None | None | N |
H/C | 0.1345 | likely_benign | 0.1507 | benign | 0.059 | Stabilizing | 0.497 | N | 0.455 | neutral | None | None | None | None | N |
H/D | 0.1963 | likely_benign | 0.2271 | benign | 0.105 | Stabilizing | 0.007 | N | 0.317 | neutral | N | 0.494058439 | None | None | N |
H/E | 0.2269 | likely_benign | 0.2568 | benign | 0.168 | Stabilizing | 0.004 | N | 0.221 | neutral | None | None | None | None | N |
H/F | 0.1684 | likely_benign | 0.1795 | benign | 0.515 | Stabilizing | 0.009 | N | 0.418 | neutral | None | None | None | None | N |
H/G | 0.2789 | likely_benign | 0.2988 | benign | -0.665 | Destabilizing | 0.008 | N | 0.28 | neutral | None | None | None | None | N |
H/I | 0.1407 | likely_benign | 0.1537 | benign | 0.518 | Stabilizing | None | N | 0.273 | neutral | None | None | None | None | N |
H/K | 0.1972 | likely_benign | 0.2084 | benign | -0.265 | Destabilizing | 0.004 | N | 0.282 | neutral | None | None | None | None | N |
H/L | 0.0872 | likely_benign | 0.0909 | benign | 0.518 | Stabilizing | None | N | 0.234 | neutral | N | 0.380231501 | None | None | N |
H/M | 0.3201 | likely_benign | 0.3314 | benign | 0.267 | Stabilizing | 0.044 | N | 0.549 | neutral | None | None | None | None | N |
H/N | 0.0909 | likely_benign | 0.1035 | benign | -0.287 | Destabilizing | None | N | 0.067 | neutral | N | 0.504928793 | None | None | N |
H/P | 0.4135 | ambiguous | 0.4398 | ambiguous | 0.256 | Stabilizing | 0.065 | N | 0.52 | neutral | N | 0.504928793 | None | None | N |
H/Q | 0.1248 | likely_benign | 0.1398 | benign | -0.12 | Destabilizing | None | N | 0.054 | neutral | N | 0.394606307 | None | None | N |
H/R | 0.0912 | likely_benign | 0.0969 | benign | -0.737 | Destabilizing | 0.007 | N | 0.279 | neutral | N | 0.446939282 | None | None | N |
H/S | 0.1618 | likely_benign | 0.1774 | benign | -0.429 | Destabilizing | 0.001 | N | 0.113 | neutral | None | None | None | None | N |
H/T | 0.1617 | likely_benign | 0.1724 | benign | -0.252 | Destabilizing | 0.008 | N | 0.271 | neutral | None | None | None | None | N |
H/V | 0.126 | likely_benign | 0.1336 | benign | 0.256 | Stabilizing | None | N | 0.248 | neutral | None | None | None | None | N |
H/W | 0.3604 | ambiguous | 0.3558 | ambiguous | 0.711 | Stabilizing | 0.245 | N | 0.429 | neutral | None | None | None | None | N |
H/Y | 0.0625 | likely_benign | 0.0669 | benign | 0.921 | Stabilizing | None | N | 0.099 | neutral | N | 0.415058937 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.