Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7244 | 21955;21956;21957 | chr2:178723277;178723276;178723275 | chr2:179588004;179588003;179588002 |
N2AB | 6927 | 21004;21005;21006 | chr2:178723277;178723276;178723275 | chr2:179588004;179588003;179588002 |
N2A | 6000 | 18223;18224;18225 | chr2:178723277;178723276;178723275 | chr2:179588004;179588003;179588002 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 1.0 | D | 0.775 | 0.623 | 0.848142195229 | gnomAD-4.0.0 | 5.47479E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49792E-06 | 0 | 4.97133E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.3823 | ambiguous | 0.378 | ambiguous | -0.372 | Destabilizing | 0.999 | D | 0.661 | neutral | D | 0.653543042 | None | None | N |
G/C | 0.5678 | likely_pathogenic | 0.5785 | pathogenic | -0.908 | Destabilizing | 0.964 | D | 0.695 | prob.neutral | None | None | None | None | N |
G/D | 0.3276 | likely_benign | 0.3425 | ambiguous | -0.521 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
G/E | 0.2741 | likely_benign | 0.2869 | benign | -0.683 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.606858305 | None | None | N |
G/F | 0.8298 | likely_pathogenic | 0.8129 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
G/H | 0.5842 | likely_pathogenic | 0.5967 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
G/I | 0.8018 | likely_pathogenic | 0.7832 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
G/K | 0.5121 | ambiguous | 0.5408 | ambiguous | -0.726 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
G/L | 0.7307 | likely_pathogenic | 0.7062 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
G/M | 0.7646 | likely_pathogenic | 0.7516 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/N | 0.3916 | ambiguous | 0.3958 | ambiguous | -0.409 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
G/P | 0.9755 | likely_pathogenic | 0.9712 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/Q | 0.3843 | ambiguous | 0.4001 | ambiguous | -0.713 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
G/R | 0.369 | ambiguous | 0.3918 | ambiguous | -0.302 | Destabilizing | 1.0 | D | 0.786 | deleterious | D | 0.628206735 | None | None | N |
G/S | 0.1997 | likely_benign | 0.2042 | benign | -0.582 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
G/T | 0.4566 | ambiguous | 0.4386 | ambiguous | -0.674 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
G/V | 0.6705 | likely_pathogenic | 0.6507 | pathogenic | -0.431 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.637695125 | None | None | N |
G/W | 0.6782 | likely_pathogenic | 0.6585 | pathogenic | -1.251 | Destabilizing | 1.0 | D | 0.763 | deleterious | D | 0.654148455 | None | None | N |
G/Y | 0.7204 | likely_pathogenic | 0.7234 | pathogenic | -0.901 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.